Literature DB >> 21487617

Using molecular simulation to predict solute solvation and partition coefficients in solvents of different polarity.

Nuno M Garrido1, Miguel Jorge, António J Queimada, Eugénia A Macedo, Ioannis G Economou.   

Abstract

A methodology is proposed for the prediction of the Gibbs energy of solvation (Δ(Solv)G) based on MD simulations. The methodology is then used to predict Δ(Solv)G of four solutes (namely propane, benzene, ethanol and acetone) in several solvents of different polarities (including n-hexane, n-hexadecane, ethylbenzene, 1-octanol, acetone and water) while testing the validity of the TraPPE force field parameters. Excellent agreement with experimental data is obtained, with average deviations of 0.2, 1.1, 0.8 and 1.2 kJ mol(-1), for the four solutes respectively. Subsequently, partition coefficients (log P) for forty different solute/solvent systems are predicted. The a priori knowledge of partition coefficient values is of high importance in chemical and pharmaceutical separation process design or as a measure of the increasingly important environmental fate. Here again, the agreement between experimental data and simulation predictions is excellent, with an absolute average deviation of 0.28 log P units. However, this deviation can be decreased down to 0.14 log P units, just by optimizing partial atomic charges of acetone in the water phase. Consequently, molecular simulation is proven to be a tool with strong physical basis able to predict log P with competitive accuracy when compared to the popular statistical methods with weak physical basis. This journal is © the Owner Societies 2011

Entities:  

Year:  2011        PMID: 21487617     DOI: 10.1039/c1cp20110g

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  3 in total

1.  A blind SAMPL6 challenge: insight into the octanol-water partition coefficients of drug-like molecules via a DFT approach.

Authors:  Evrim Arslan; Basak K Findik; Viktorya Aviyente
Journal:  J Comput Aided Mol Des       Date:  2020-01-14       Impact factor: 3.686

2.  Using MD Simulations To Calculate How Solvents Modulate Solubility.

Authors:  Shuai Liu; Shannon Cao; Kevin Hoang; Kayla L Young; Andrew S Paluch; David L Mobley
Journal:  J Chem Theory Comput       Date:  2016-03-02       Impact factor: 6.006

3.  A Polarization-Consistent Model for Alcohols to Predict Solvation Free Energies.

Authors:  Maria Cecilia Barrera; Miguel Jorge
Journal:  J Chem Inf Model       Date:  2020-02-03       Impact factor: 4.956

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.