Literature DB >> 21487502

Unusual biophysics of immune signaling-related intrinsically disordered proteins.

Alexander B Sigalov1.   

Abstract

Intrinsically disordered (ID) regions, the regions that lack a well-defined three-dimensional structure under physiological conditions, are preferentially located in the cytoplasmic segments of plasma membrane proteins, many of which are known to be involved in cell signaling. This is in line with our studies that demonstrated that cytoplasmic domains of signaling subunits of immune receptors, including those of ζ, CD3ε, CD3δ and CD3γ chains of T cell receptor, Igα and Igβ chains of B cell receptor as well as the Fc receptor γ chain represent a novel class of ID proteins (IDPs). The domains all have one or more copies of an immunoreceptor tyrosine-based activation motif, tyrosine residues of which are phosphorylated upon receptor engagement in an early and obligatory event in the signaling cascade. Our studies of these IDPs revealed several unusual biophysical phenomena, including (1) the specific dimerization of disordered protein molecules, (2) the fast and slow dimerization equilibrium, depending on the protein, (3) no disorder-to-order transition and the lack of significant chemical shift and peak intensity changes upon dimerization or interaction with a well-folded partner protein and (4) the dual mode of binding to model membranes (with and without folding), depending on the lipid bilayer stability. Here, I highlight several of these studies that not only facilitate a rethinking process of the fundamental paradigms in protein biophysics but also open new perspectives on the molecular mechanisms involved in receptor signaling.

Entities:  

Year:  2010        PMID: 21487502      PMCID: PMC3062382          DOI: 10.4161/self.1.4.13641

Source DB:  PubMed          Journal:  Self Nonself        ISSN: 1938-2030


  55 in total

Review 1.  Recognition between flexible protein molecules: induced and assisted folding.

Authors:  A P Demchenko
Journal:  J Mol Recognit       Date:  2001 Jan-Feb       Impact factor: 2.137

Review 2.  Mapping protein-protein interactions in solution by NMR spectroscopy.

Authors:  Erik R P Zuiderweg
Journal:  Biochemistry       Date:  2002-01-08       Impact factor: 3.162

Review 3.  Insights into the structure and dynamics of unfolded proteins from nuclear magnetic resonance.

Authors:  H Jane Dyson; Peter E Wright
Journal:  Adv Protein Chem       Date:  2002

Review 4.  Amyloidogenesis of natively unfolded proteins.

Authors:  Vladimir N Uversky
Journal:  Curr Alzheimer Res       Date:  2008-06       Impact factor: 3.498

5.  Lipid-binding activity of intrinsically unstructured cytoplasmic domains of multichain immune recognition receptor signaling subunits.

Authors:  Alexander B Sigalov; Dikran A Aivazian; Vladimir N Uversky; Lawrence J Stern
Journal:  Biochemistry       Date:  2006-12-19       Impact factor: 3.162

6.  Structural and dynamic characterization of partially folded states of apomyoglobin and implications for protein folding.

Authors:  D Eliezer; J Yao; H J Dyson; P E Wright
Journal:  Nat Struct Biol       Date:  1998-02

7.  Solution structure of the KIX domain of CBP bound to the transactivation domain of CREB: a model for activator:coactivator interactions.

Authors:  I Radhakrishnan; G C Pérez-Alvarado; D Parker; H J Dyson; M R Montminy; P E Wright
Journal:  Cell       Date:  1997-12-12       Impact factor: 41.582

Review 8.  Protein intrinsic disorder and oligomericity in cell signaling.

Authors:  Alexander B Sigalov
Journal:  Mol Biosyst       Date:  2009-11-03

9.  Regulation of T cell receptor activation by dynamic membrane binding of the CD3epsilon cytoplasmic tyrosine-based motif.

Authors:  Chenqi Xu; Etienne Gagnon; Matthew E Call; Jason R Schnell; Charles D Schwieters; Christopher V Carman; James J Chou; Kai W Wucherpfennig
Journal:  Cell       Date:  2008-11-14       Impact factor: 41.582

10.  The intrinsically disordered C-terminal domain of the measles virus nucleoprotein interacts with the C-terminal domain of the phosphoprotein via two distinct sites and remains predominantly unfolded.

Authors:  Jean-Marie Bourhis; Véronique Receveur-Bréchot; Michael Oglesbee; Xinsheng Zhang; Matthew Buccellato; Hervé Darbon; Bruno Canard; Stéphanie Finet; Sonia Longhi
Journal:  Protein Sci       Date:  2005-08       Impact factor: 6.725

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  5 in total

1.  Cells diversify transmembrane signaling through the controlled chaos of protein disorder.

Authors:  Alexander B Sigalov
Journal:  Self Nonself       Date:  2011-04-01

2.  Differential occurrence of protein intrinsic disorder in the cytoplasmic signaling domains of cell receptors.

Authors:  Alexander B Sigalov; Vladimir N Uversky
Journal:  Self Nonself       Date:  2011-01-01

Review 3.  The Structural and Functional Diversity of Intrinsically Disordered Regions in Transmembrane Proteins.

Authors:  Rajeswari Appadurai; Vladimir N Uversky; Anand Srivastava
Journal:  J Membr Biol       Date:  2019-05-28       Impact factor: 1.843

4.  The Anti-Inflammatory Protein TNIP1 Is Intrinsically Disordered with Structural Flexibility Contributed by Its AHD1-UBAN Domain.

Authors:  Rambon Shamilov; Olga Vinogradova; Brian J Aneskievich
Journal:  Biomolecules       Date:  2020-11-10

5.  Multiple fuzzy interactions in the moonlighting function of thymosin-β4.

Authors:  Agnes Tantos; Beata Szabo; Andras Lang; Zoltan Varga; Maksym Tsylonok; Monika Bokor; Tamas Verebelyi; Pawel Kamasa; Kalman Tompa; Andras Perczel; Laszlo Buday; Si Hyung Lee; Yejin Choo; Kyou-Hoon Han; Peter Tompa
Journal:  Intrinsically Disord Proteins       Date:  2013-09-11
  5 in total

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