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Literature DB >> 21478339

Complete genome sequence of Burkholderia gladioli BSR3.

Young-Su Seo¹, Jaeyun Lim, Beom-Soon Choi, Hongsup Kim, Eunhye Goo, Bongsoo Lee, Jong-Sung Lim, Ik-Young Choi, Jae Sun Moon, Jinwoo Kim, Ingyu Hwang.

Abstract

We report the complete genome sequence of Burkholderia gladioli BSR3, isolated from a diseased rice sheath in South Korea.

Entities: Species

Mesh：

Year: 2011 PMID： 21478339 PMCID： PMC3133191 DOI： 10.1128/JB.00420-11

Source DB: PubMed Journal: J Bacteriol ISSN： 0021-9193 Impact factor: 3.490

5 in total

1. Artemis: sequence visualization and annotation.

Authors: K Rutherford; J Parkhill; J Crook; T Horsnell; P Rice; M A Rajandream; B Barrell
Journal: Bioinformatics Date: 2000-10 Impact factor: 6.937

2. Improved microbial gene identification with GLIMMER.

Authors: A L Delcher; D Harmon; S Kasif; O White; S L Salzberg
Journal: Nucleic Acids Res Date: 1999-12-01 Impact factor: 16.971

3. GeneMark.hmm: new solutions for gene finding.

Authors: A V Lukashin; M Borodovsky
Journal: Nucleic Acids Res Date: 1998-02-15 Impact factor: 16.971

4. Prodigal: prokaryotic gene recognition and translation initiation site identification.

Authors: Doug Hyatt; Gwo-Liang Chen; Philip F Locascio; Miriam L Land; Frank W Larimer; Loren J Hauser
Journal: BMC Bioinformatics Date: 2010-03-08 Impact factor: 3.169

5. GenBank.

Authors: Dennis A Benson; Ilene Karsch-Mizrachi; David J Lipman; James Ostell; David L Wheeler
Journal: Nucleic Acids Res Date: 2007-12-11 Impact factor: 16.971

5 in total

18 in total

Review 1. Maintenance of multipartite genome system and its functional significance in bacteria.

Authors: Hari Sharan Misra; Ganesh Kumar Maurya; Swathi Kota; Vijaya Kumar Charaka
Journal: J Genet Date: 2018-09 Impact factor: 1.166

2. The Siderophore Product Ornibactin Is Required for the Bactericidal Activity of Burkholderia contaminans MS14.

Authors: Peng Deng; Adam Foxfire; Jianhong Xu; Sonya M Baird; Jiayuan Jia; Keren H Delgado; Ronald Shin; Leif Smith; Shi-En Lu
Journal: Appl Environ Microbiol Date: 2017-03-31 Impact factor: 4.792

3. Culturing and Characterization of Gut Symbiont Burkholderia spp. from the Southern Chinch Bug, Blissus insularis (Hemiptera: Blissidae).

Authors: Yao Xu; Eileen A Buss; Drion G Boucias
Journal: Appl Environ Microbiol Date: 2016-05-16 Impact factor: 4.792

4. Survey of the Applications of NGS to Whole-Genome Sequencing and Expression Profiling.

Authors: Jong-Sung Lim; Beom-Soon Choi; Jeong-Soo Lee; Chanseok Shin; Tae-Jin Yang; Jae-Sung Rhee; Jae-Seong Lee; Ik-Young Choi
Journal: Genomics Inform Date: 2012-03-31

5. Kill and cure: genomic phylogeny and bioactivity of Burkholderia gladioli bacteria capable of pathogenic and beneficial lifestyles.

Authors: Cerith Jones; Gordon Webster; Alex J Mullins; Matthew Jenner; Matthew J Bull; Yousef Dashti; Theodore Spilker; Julian Parkhill; Thomas R Connor; John J LiPuma; Gregory L Challis; Eshwar Mahenthiralingam
Journal: Microb Genom Date: 2021-01

6. MexXY multidrug efflux system of Pseudomonas aeruginosa.

Authors: Yuji Morita; Junko Tomida; Yoshiaki Kawamura
Journal: Front Microbiol Date: 2012-11-28 Impact factor: 5.640

7. Comparative genome analysis of rice-pathogenic Burkholderia provides insight into capacity to adapt to different environments and hosts.

Authors: Young-Su Seo; Jae Yun Lim; Jungwook Park; Sunyoung Kim; Hyun-Hee Lee; Hoon Cheong; Sang-Mok Kim; Jae Sun Moon; Ingyu Hwang
Journal: BMC Genomics Date: 2015-05-06 Impact factor: 3.969

8. Plant-associated symbiotic Burkholderia species lack hallmark strategies required in mammalian pathogenesis.

Authors: Annette A Angus; Christina M Agapakis; Stephanie Fong; Shailaja Yerrapragada; Paulina Estrada-de los Santos; Paul Yang; Nannie Song; Stephanie Kano; Jésus Caballero-Mellado; Sergio M de Faria; Felix D Dakora; George Weinstock; Ann M Hirsch
Journal: PLoS One Date: 2014-01-08 Impact factor: 3.240

9. Pan-Genome Analysis Reveals Host-Specific Functional Divergences in Burkholderia gladioli.

Authors: Hyun-Hee Lee; Jungwook Park; Hyejung Jung; Young-Su Seo
Journal: Microorganisms Date: 2021-05-22

10. Evolution of a pathogen: a comparative genomics analysis identifies a genetic pathway to pathogenesis in Acinetobacter.

Authors: Jason W Sahl; John D Gillece; James M Schupp; Victor G Waddell; Elizabeth M Driebe; David M Engelthaler; Paul Keim
Journal: PLoS One Date: 2013-01-24 Impact factor: 3.240