Literature DB >> 21478072

Sparse brain network recovery under compressed sensing.

Hyekyoung Lee1, Dong Soo Lee, Hyejin Kang, Boong-Nyun Kim, Moo K Chung.   

Abstract

Partial correlation is a useful connectivity measure for brain networks, especially, when it is needed to remove the confounding effects in highly correlated networks. Since it is difficult to estimate the exact partial correlation under the small- n large- p situation, a sparseness constraint is generally introduced. In this paper, we consider the sparse linear regression model with a l(1)-norm penalty, also known as the least absolute shrinkage and selection operator (LASSO), for estimating sparse brain connectivity. LASSO is a well-known decoding algorithm in the compressed sensing (CS). The CS theory states that LASSO can reconstruct the exact sparse signal even from a small set of noisy measurements. We briefly show that the penalized linear regression for partial correlation estimation is related to CS. It opens a new possibility that the proposed framework can be used for a sparse brain network recovery. As an illustration, we construct sparse brain networks of 97 regions of interest (ROIs) obtained from FDG-PET imaging data for the autism spectrum disorder (ASD) children and the pediatric control (PedCon) subjects. As validation, we check the network reproducibilities by leave-one-out cross validation and compare the clustered structures derived from the brain networks of ASD and PedCon.

Entities:  

Mesh:

Year:  2011        PMID: 21478072     DOI: 10.1109/TMI.2011.2140380

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  47 in total

1.  Graph-guided joint prediction of class label and clinical scores for the Alzheimer's disease.

Authors:  Guan Yu; Yufeng Liu; Dinggang Shen
Journal:  Brain Struct Funct       Date:  2015-10-17       Impact factor: 3.270

2.  Connectivity strength-weighted sparse group representation-based brain network construction for MCI classification.

Authors:  Renping Yu; Han Zhang; Le An; Xiaobo Chen; Zhihui Wei; Dinggang Shen
Journal:  Hum Brain Mapp       Date:  2017-02-02       Impact factor: 5.038

3.  Toward a Better Estimation of Functional Brain Network for Mild Cognitive Impairment Identification: A Transfer Learning View.

Authors:  Weikai Li; Limei Zhang; Lishan Qiao; Dinggang Shen
Journal:  IEEE J Biomed Health Inform       Date:  2019-08-09       Impact factor: 5.772

4.  Fusion of ULS Group Constrained High- and Low-Order Sparse Functional Connectivity Networks for MCI Classification.

Authors:  Yang Li; Jingyu Liu; Ziwen Peng; Can Sheng; Minjeong Kim; Pew-Thian Yap; Chong-Yaw Wee; Dinggang Shen
Journal:  Neuroinformatics       Date:  2020-01

5.  Localizing Sources of Brain Disease Progression with Network Diffusion Model.

Authors:  Chenhui Hu; Xue Hua; Jun Ying; Paul M Thompson; Georges E Fakhri; Quanzheng Li
Journal:  IEEE J Sel Top Signal Process       Date:  2016-08-19       Impact factor: 6.856

6.  Predicting cognitive data from medical images using sparse linear regression.

Authors:  Benjamin M Kandel; David A Wolk; James C Gee; Brian Avants
Journal:  Inf Process Med Imaging       Date:  2013

7.  Persistent Homology in Sparse Regression and Its Application to Brain Morphometry.

Authors:  Moo K Chung; Jamie L Hanson; Jieping Ye; Richard J Davidson; Seth D Pollak
Journal:  IEEE Trans Med Imaging       Date:  2015-03-24       Impact factor: 10.048

8.  Estimating functional brain networks by incorporating a modularity prior.

Authors:  Lishan Qiao; Han Zhang; Minjeong Kim; Shenghua Teng; Limei Zhang; Dinggang Shen
Journal:  Neuroimage       Date:  2016-07-30       Impact factor: 6.556

9.  Weighted Graph Regularized Sparse Brain Network Construction for MCI Identification.

Authors:  Renping Yu; Lishan Qiao; Mingming Chen; Seong-Whan Lee; Xuan Fei; Dinggang Shen
Journal:  Pattern Recognit       Date:  2019-01-08       Impact factor: 7.740

10.  Strength and Similarity Guided Group-level Brain Functional Network Construction for MCI Diagnosis.

Authors:  Yu Zhang; Han Zhang; Xiaobo Chen; Mingxia Liu; Xiaofeng Zhu; Seong-Whan Lee; Dinggang Shen
Journal:  Pattern Recognit       Date:  2018-12-07       Impact factor: 7.740

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.