Literature DB >> 21476577

Density functional theory study of an all ferrous 4Fe-4S cluster.

Mrinmoy Chakrabarti1, Eckard Münck, Emile L Bominaar.   

Abstract

The all-ferrous, carbene-capped Fe(4)S(4) cluster, synthesized by Deng and Holm (DH complex), has been studied with density functional theory (DFT). The geometry of the complex was optimized for several electronic configurations. The lowest energy was obtained for the broken-symmetry (BS) configuration derived from the ferromagnetic state by reversing the spin projection of one of the high spin (S(i) = 2) irons. The optimized geometry of the latter configuration contains one unique and three equivalent iron sites, which are both structurally and electronically clearly distinguishable. For example, a distinctive feature of the unique iron site is the diagonal Fe···S distance, which is 0.3 Å longer than for the equivalent irons. The calculated (57)Fe hyperfine parameters show the same 1:3 pattern as observed in the Mössbauer spectra and are in good agreement with experiment. BS analysis of the exchange interactions in the optimized geometry for the 1:3, M(S) = 4, BS configuration confirms the prediction of an earlier study that the unique site is coupled to the three equivalent ones by strong antiferromagnetic exchange (J > 0 in J Σ(j<4)Ŝ(4)·Ŝ(j)) and that the latter are mutually coupled by ferromagnetic exchange (J' < 0 in J' Σ(i<j<4)Ŝ(i)·Ŝ(j)). In combination, these exchange couplings stabilize an S = 4 ground state in which the composite spin of the three equivalent sites (S(123) = 6) is antiparallel to the spin (S(4) = 2) of the unique site. Thus, DFT analysis supports the idea that the unprecedented high value of the spin of the DH complex and, by analogy, of the all-ferrous cluster of the Fe-protein of nitrogenase, results from a remarkably strong dependence of the exchange interactions on cluster core geometry. The structure dependence of the exchange-coupling constants in the Fe(II)-(μ(3)-S)(2)-Fe(II) moieties of the all-ferrous clusters is compared with the magneto-structural correlations observed in the data for dinuclear copper complexes. Finally, we discuss two all-ferric clusters in the light of the results for the all-ferrous cluster.

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Year:  2011        PMID: 21476577      PMCID: PMC3107574          DOI: 10.1021/ic102287j

Source DB:  PubMed          Journal:  Inorg Chem        ISSN: 0020-1669            Impact factor:   5.165


  13 in total

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Authors:  Barbara K. Burgess; David J. Lowe
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Authors:  H C Angove; S J Yoo; E Münck; B K Burgess
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Authors:  Christopher R Sharp; Jeremiah S Duncan; Sonny C Lee
Journal:  Inorg Chem       Date:  2010-07-19       Impact factor: 5.165

4.  Initial synthesis and structure of an all-ferrous analogue of the fully reduced [Fe4S4]0 cluster of the nitrogenase iron protein.

Authors:  Thomas A Scott; Curtis P Berlinguette; Richard H Holm; Hong-Cai Zhou
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5.  Spectroscopic evidence for an all-ferrous [4Fe-4S]0 cluster in the superreduced activator of 2-hydroxyglutaryl-CoA dehydratase from Acidaminococcus fermentans.

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Journal:  J Biol Inorg Chem       Date:  2008-05       Impact factor: 3.358

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Authors:  Peter Baran; Roman Boca; Indranil Chakraborty; John Giapintzakis; Radovan Herchel; Qing Huang; John E McGrady; Raphael G Raptis; Yiannis O Sanakis; Athanasios Simopouloso
Journal:  Inorg Chem       Date:  2007-12-14       Impact factor: 5.165

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8.  Stabilization of fully reduced iron-sulfur clusters by carbene ligation: the [FenSn]0 oxidation levels (n = 4, 8).

Authors:  Liang Deng; R H Holm
Journal:  J Am Chem Soc       Date:  2008-07-01       Impact factor: 15.419

9.  Mössbauer, electron paramagnetic resonance, and theoretical studies of a carbene-based all-ferrous Fe4S4 cluster: electronic origin and structural identification of the unique spectroscopic site.

Authors:  Mrinmoy Chakrabarti; Liang Deng; R H Holm; Eckard Münck; Emile L Bominaar
Journal:  Inorg Chem       Date:  2009-04-06       Impact factor: 5.165

10.  Cubane-type Co4S4 clusters: synthesis, redox series, and magnetic ground states.

Authors:  Liang Deng; Eckhard Bill; Karl Wieghardt; R H Holm
Journal:  J Am Chem Soc       Date:  2009-08-12       Impact factor: 15.419

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3.  Characterization of [4Fe-4S] cluster vibrations and structure in nitrogenase Fe protein at three oxidation levels via combined NRVS, EXAFS, and DFT analyses.

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4.  Protein dynamics and the all-ferrous [Fe4 S4 ] cluster in the nitrogenase iron protein.

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Review 6.  Nitrogenase Fe Protein: A Multi-Tasking Player in Substrate Reduction and Metallocluster Assembly.

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7.  Nonenzymatic synthesis of the P-cluster in the nitrogenase MoFe protein: evidence of the involvement of all-ferrous [Fe4S4](0) intermediates.

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8.  The Mössbauer Parameters of the Proximal Cluster of Membrane-Bound Hydrogenase Revisited: A Density Functional Theory Study.

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