Literature DB >> 21475246

Breaking the rules: bacteria that use several DNA polymerase IIIs.

Charles S McHenry1.   

Abstract

Studies using Escherichia coli DNA polymerase (Pol) III as the prototype for bacterial DNA replication have suggested that--in contrast to eukaryotes--one replicase performs all of the main functions at the replication fork. However, recent studies have revealed that replication in other bacteria requires two forms of Pol III, one of which seems to extend RNA primers by only a few nucleotides before transferring the product to the other polymerase--an arrangement analogous to that in eukaryotes. Yet another group of bacteria encode a second Pol III (ImuC), which apparently replaces a Pol Y-type polymerase (Pol V) that is required for induced mutagenesis in E. coli. A complete understanding of complex bacterial replicases will allow the simultaneous biochemical screening of all their components and, thus, the identification of new antibacterial compounds.

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Year:  2011        PMID: 21475246      PMCID: PMC3090020          DOI: 10.1038/embor.2011.51

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  80 in total

1.  Two DNA polymerases may be required for synthesis of the lagging DNA strand of simian virus 40.

Authors:  T Nethanel; G Kaufmann
Journal:  J Virol       Date:  1990-12       Impact factor: 5.103

2.  Identification of the beta-binding domain of the alpha subunit of Escherichia coli polymerase III holoenzyme.

Authors:  D R Kim; C S McHenry
Journal:  J Biol Chem       Date:  1996-08-23       Impact factor: 5.157

3.  Ancient duplication of DNA polymerase inferred from analysis of complete bacterial genomes.

Authors:  E V Koonin; P Bork
Journal:  Trends Biochem Sci       Date:  1996-04       Impact factor: 13.807

4.  Compilation, alignment, and phylogenetic relationships of DNA polymerases.

Authors:  D K Braithwaite; J Ito
Journal:  Nucleic Acids Res       Date:  1993-02-25       Impact factor: 16.971

5.  Coupling of a replicative polymerase and helicase: a tau-DnaB interaction mediates rapid replication fork movement.

Authors:  S Kim; H G Dallmann; C S McHenry; K J Marians
Journal:  Cell       Date:  1996-02-23       Impact factor: 41.582

6.  The beta subunit of the DNA polymerase III holoenzyme becomes inaccessible to antibody after formation of an initiation complex with primed DNA.

Authors:  K O Johanson; C S McHenry
Journal:  J Biol Chem       Date:  1982-10-25       Impact factor: 5.157

7.  Biotin tagging deletion analysis of domain limits involved in protein-macromolecular interactions. Mapping the tau binding domain of the DNA polymerase III alpha subunit.

Authors:  D R Kim; C S McHenry
Journal:  J Biol Chem       Date:  1996-08-23       Impact factor: 5.157

8.  Multiple pathways for SOS-induced mutagenesis in Escherichia coli: an overexpression of dinB/dinP results in strongly enhancing mutagenesis in the absence of any exogenous treatment to damage DNA.

Authors:  S R Kim; G Maenhaut-Michel; M Yamada; Y Yamamoto; K Matsui; T Sofuni; T Nohmi; H Ohmori
Journal:  Proc Natl Acad Sci U S A       Date:  1997-12-09       Impact factor: 11.205

9.  Structure and mechanism of inosine monophosphate dehydrogenase in complex with the immunosuppressant mycophenolic acid.

Authors:  M D Sintchak; M A Fleming; O Futer; S A Raybuck; S P Chambers; P R Caron; M A Murcko; K P Wilson
Journal:  Cell       Date:  1996-06-14       Impact factor: 41.582

10.  Primosome assembly site in Bacillus subtilis.

Authors:  C Bruand; S D Ehrlich; L Jannière
Journal:  EMBO J       Date:  1995-06-01       Impact factor: 11.598

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  23 in total

Review 1.  DNA replication fidelity in Escherichia coli: a multi-DNA polymerase affair.

Authors:  Iwona J Fijalkowska; Roel M Schaaper; Piotr Jonczyk
Journal:  FEMS Microbiol Rev       Date:  2012-04-05       Impact factor: 16.408

Review 2.  Translesion DNA synthesis and mutagenesis in prokaryotes.

Authors:  Robert P Fuchs; Shingo Fujii
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-12-01       Impact factor: 10.005

3.  The PriA replication restart protein blocks replicase access prior to helicase assembly and directs template specificity through its ATPase activity.

Authors:  Carol M Manhart; Charles S McHenry
Journal:  J Biol Chem       Date:  2012-12-20       Impact factor: 5.157

Review 4.  Evaluating evolutionary models of stress-induced mutagenesis in bacteria.

Authors:  R Craig MacLean; Clara Torres-Barceló; Richard Moxon
Journal:  Nat Rev Genet       Date:  2013-02-12       Impact factor: 53.242

5.  Asymmetric Context-Dependent Mutation Patterns Revealed through Mutation-Accumulation Experiments.

Authors:  Way Sung; Matthew S Ackerman; Jean-François Gout; Samuel F Miller; Emily Williams; Patricia L Foster; Michael Lynch
Journal:  Mol Biol Evol       Date:  2015-03-06       Impact factor: 16.240

Review 6.  DNA repair and genome maintenance in Bacillus subtilis.

Authors:  Justin S Lenhart; Jeremy W Schroeder; Brian W Walsh; Lyle A Simmons
Journal:  Microbiol Mol Biol Rev       Date:  2012-09       Impact factor: 11.056

Review 7.  Ribonucleotides in bacterial DNA.

Authors:  Jeremy W Schroeder; Justin R Randall; Lindsay A Matthews; Lyle A Simmons
Journal:  Crit Rev Biochem Mol Biol       Date:  2014-11-12       Impact factor: 8.250

Review 8.  Bacterial replicases and related polymerases.

Authors:  Charles S McHenry
Journal:  Curr Opin Chem Biol       Date:  2011-08-19       Impact factor: 8.822

9.  Synthetic nucleotides as probes of DNA polymerase specificity.

Authors:  Jason M Walsh; Penny J Beuning
Journal:  J Nucleic Acids       Date:  2012-06-07

10.  Functional interplay of DnaE polymerase, DnaG primase and DnaC helicase within a ternary complex, and primase to polymerase hand-off during lagging strand DNA replication in Bacillus subtilis.

Authors:  Olivier Rannou; Emmanuelle Le Chatelier; Marilynn A Larson; Hamid Nouri; Bérengère Dalmais; Charles Laughton; Laurent Jannière; Panos Soultanas
Journal:  Nucleic Acids Res       Date:  2013-04-05       Impact factor: 16.971

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