Literature DB >> 2147057

Conserved domains of human U4 snRNA required for snRNP and spliceosome assembly.

C Wersig1, A Bindereif.   

Abstract

U4 snRNA is phylogenetically highly conserved and organized in several domains. To determine the function of each of the domains of human U4 snRNA in the multi-step process of snRNP and spliceosome assembly, we used reconstitution procedures in combination with snRNA mutagenesis. The highly conserved 5' terminal domain of U4 snRNA consists of the stem I and stem II regions that have been proposed to base pair with U6 snRNA, and the 5' stem-loop structure. We found that each of these structural elements is essential for spliceosome assembly. However, only the stem II region is required for U4-U6 interaction, and none of these elements for Sm protein binding. In contrast, the 3' terminal domain of U4 snRNA containing the Sm binding site is dispensable for both U4-U6 interaction and spliceosome assembly. Our results support an organization of the U4 snRNP into multiple functional domains, each of which acts at distinct stages of snRNP and spliceosome assembly.

Entities:  

Mesh:

Substances:

Year:  1990        PMID: 2147057      PMCID: PMC332485          DOI: 10.1093/nar/18.21.6223

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  37 in total

1.  Identification of a yeast snRNP protein and detection of snRNP-snRNP interactions.

Authors:  M Lossky; G J Anderson; S P Jackson; J Beggs
Journal:  Cell       Date:  1987-12-24       Impact factor: 41.582

2.  Interactions between small nuclear ribonucleoprotein particles in formation of spliceosomes.

Authors:  M M Konarska; P A Sharp
Journal:  Cell       Date:  1987-06-19       Impact factor: 41.582

3.  Gel electrophoretic isolation of splicing complexes containing U1 small nuclear ribonucleoprotein particles.

Authors:  M Zillmann; M L Zapp; S M Berget
Journal:  Mol Cell Biol       Date:  1988-02       Impact factor: 4.272

4.  Splice site selection and ribonucleoprotein complex assembly during in vitro pre-mRNA splicing.

Authors:  K K Nelson; M R Green
Journal:  Genes Dev       Date:  1988-03       Impact factor: 11.361

5.  The Mr 70,000 protein of the U1 small nuclear ribonucleoprotein particle binds to the 5' stem-loop of U1 RNA and interacts with Sm domain proteins.

Authors:  J R Patton; T Pederson
Journal:  Proc Natl Acad Sci U S A       Date:  1988-02       Impact factor: 11.205

6.  Spliceosome assembly involves the binding and release of U4 small nuclear ribonucleoprotein.

Authors:  A I Lamond; M M Konarska; P J Grabowski; P A Sharp
Journal:  Proc Natl Acad Sci U S A       Date:  1988-01       Impact factor: 11.205

7.  Spliceosome assembly in yeast.

Authors:  S C Cheng; J Abelson
Journal:  Genes Dev       Date:  1987-11       Impact factor: 11.361

8.  In vitro assembly of U1 snRNPs.

Authors:  J Hamm; M Kazmaier; I W Mattaj
Journal:  EMBO J       Date:  1987-11       Impact factor: 11.598

9.  An ordered pathway of snRNP binding during mammalian pre-mRNA splicing complex assembly.

Authors:  A Bindereif; M R Green
Journal:  EMBO J       Date:  1987-08       Impact factor: 11.598

10.  Purification of the individual snRNPs U1, U2, U5 and U4/U6 from HeLa cells and characterization of their protein constituents.

Authors:  P Bringmann; R Lührmann
Journal:  EMBO J       Date:  1986-12-20       Impact factor: 11.598

View more
  23 in total

1.  Domains of human U4atac snRNA required for U12-dependent splicing in vivo.

Authors:  Girish C Shukla; Andrea J Cole; Rosemary C Dietrich; Richard A Padgett
Journal:  Nucleic Acids Res       Date:  2002-11-01       Impact factor: 16.971

2.  Reconstitution of functional mammalian U4 small nuclear ribonucleoprotein: Sm protein binding is not essential for splicing in vitro.

Authors:  C Wersig; A Bindereif
Journal:  Mol Cell Biol       Date:  1992-04       Impact factor: 4.272

3.  In vitro reconstitution of yeast splicing with U4 snRNA reveals multiple roles for the 3' stem-loop.

Authors:  Amy J Hayduk; Martha R Stark; Stephen D Rader
Journal:  RNA       Date:  2012-03-12       Impact factor: 4.942

4.  Free energy landscapes of RNA/RNA complexes: with applications to snRNA complexes in spliceosomes.

Authors:  Song Cao; Shi-Jie Chen
Journal:  J Mol Biol       Date:  2005-12-21       Impact factor: 5.469

5.  Enhancement of U4/U6 small nuclear ribonucleoprotein particle association in Cajal bodies predicted by mathematical modeling.

Authors:  Mirko Klingauf; David Stanek; Karla M Neugebauer
Journal:  Mol Biol Cell       Date:  2006-09-20       Impact factor: 4.138

6.  A new U6 small nuclear ribonucleoprotein-specific protein conserved between cis- and trans-splicing systems.

Authors:  K Gröning; Z Palfi; S Gupta; M Cross; T Wolff; A Bindereif
Journal:  Mol Cell Biol       Date:  1991-04       Impact factor: 4.272

7.  The conserved 3' end domain of U6atac snRNA can direct U6 snRNA to the minor spliceosome.

Authors:  Rosemary C Dietrich; Richard A Padgett; Girish C Shukla
Journal:  RNA       Date:  2009-04-16       Impact factor: 4.942

8.  Dynamic control of Cajal body number during zebrafish embryogenesis.

Authors:  Magdalena Strzelecka; Andrew C Oates; Karla M Neugebauer
Journal:  Nucleus       Date:  2010 Jan-Feb       Impact factor: 4.197

9.  Involvement of the spliceosomal U4 small nuclear RNA in heterochromatic gene silencing at fission yeast centromeres.

Authors:  Madoka Chinen; Misato Morita; Kazuhiro Fukumura; Tokio Tani
Journal:  J Biol Chem       Date:  2009-12-14       Impact factor: 5.157

10.  3'-cyclic phosphorylation of U6 snRNA leads to recruitment of recycling factor p110 through LSm proteins.

Authors:  Konstantin Licht; Jan Medenbach; Reinhard Lührmann; Christian Kambach; Albrecht Bindereif
Journal:  RNA       Date:  2008-06-20       Impact factor: 4.942

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.