Literature DB >> 21468233

A role for phosphorylated Pol II CTD in modulating transcription coupled histone dynamics.

Marla M Spain1, Chhabi K Govind.   

Abstract

Histone acetylation modulates histone occupancy both at promoters and in coding sequences. Based on our recent observation that HDACs in the budding yeast, Saccharomyces cerevisiae, are co-transcriptionally recruited to coding regions by elongating polymerases, we propose a model in which Pol II facilitates recruitment of chromatin remodeling complexes as well as other factors required for productive elongation.

Entities:  

Year:  2011        PMID： 21468233      PMCID： PMC3062398          DOI： 10.4161/trns.2.2.14638

Source DB:  PubMed          Journal:  Transcription        ISSN： 2154-1272


  35 in total

1.  Two functionally distinct forms of the RSC nucleosome-remodeling complex, containing essential AT hook, BAH, and bromodomains.

Authors:  B R Cairns; A Schlichter; H Erdjument-Bromage; P Tempst; R D Kornberg; F Winston
Journal:  Mol Cell       Date:  1999-11       Impact factor: 17.970

2.  Targeted recruitment of Set1 histone methylase by elongating Pol II provides a localized mark and memory of recent transcriptional activity.

Authors:  Huck Hui Ng; François Robert; Richard A Young; Kevin Struhl
Journal:  Mol Cell       Date:  2003-03       Impact factor: 17.970

3.  RSC exploits histone acetylation to abrogate the nucleosomal block to RNA polymerase II elongation.

Authors:  Michael Carey; Bing Li; Jerry L Workman
Journal:  Mol Cell       Date:  2006-11-03       Impact factor: 17.970

4.  Histone crosstalk between H2B monoubiquitination and H3 methylation mediated by COMPASS.

Authors:  Jung-Shin Lee; Abhijit Shukla; Jessica Schneider; Selene K Swanson; Michael P Washburn; Laurence Florens; Sukesh R Bhaumik; Ali Shilatifard
Journal:  Cell       Date:  2007-12-14       Impact factor: 41.582

Review 5.  Functions of site-specific histone acetylation and deacetylation.

Authors:  Mona D Shahbazian; Michael Grunstein
Journal:  Annu Rev Biochem       Date:  2007       Impact factor: 23.643

6.  NuA4 lysine acetyltransferase Esa1 is targeted to coding regions and stimulates transcription elongation with Gcn5.

Authors:  Daniel S Ginsburg; Chhabi K Govind; Alan G Hinnebusch
Journal:  Mol Cell Biol       Date:  2009-10-12       Impact factor: 4.272

7.  Histone H3 methylation by Set2 directs deacetylation of coding regions by Rpd3S to suppress spurious intragenic transcription.

Authors:  Michael J Carrozza; Bing Li; Laurence Florens; Tamaki Suganuma; Selene K Swanson; Kenneth K Lee; Wei-Jong Shia; Scott Anderson; John Yates; Michael P Washburn; Jerry L Workman
Journal:  Cell       Date:  2005-11-18       Impact factor: 41.582

8.  Cotranscriptional set2 methylation of histone H3 lysine 36 recruits a repressive Rpd3 complex.

Authors:  Michael-Christopher Keogh; Siavash K Kurdistani; Stephanie A Morris; Seong Hoon Ahn; Vladimir Podolny; Sean R Collins; Maya Schuldiner; Kayu Chin; Thanuja Punna; Natalie J Thompson; Charles Boone; Andrew Emili; Jonathan S Weissman; Timothy R Hughes; Brian D Strahl; Michael Grunstein; Jack F Greenblatt; Stephen Buratowski; Nevan J Krogan
Journal:  Cell       Date:  2005-11-18       Impact factor: 41.582

9.  Mutations in SPT16/CDC68 suppress cis- and trans-acting mutations that affect promoter function in Saccharomyces cerevisiae.

Authors:  E A Malone; C D Clark; A Chiang; F Winston
Journal:  Mol Cell Biol       Date:  1991-11       Impact factor: 4.272

10.  Phosphorylation of the Pol II CTD by KIN28 enhances BUR1/BUR2 recruitment and Ser2 CTD phosphorylation near promoters.

Authors:  Hongfang Qiu; Cuihua Hu; Alan G Hinnebusch
Journal:  Mol Cell       Date:  2009-03-27       Impact factor: 17.970
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  11 in total

1.  Multiple roles for the Ess1 prolyl isomerase in the RNA polymerase II transcription cycle.

Authors:  Zhuo Ma; David Atencio; Cassandra Barnes; Holland DeFiglio; Steven D Hanes
Journal:  Mol Cell Biol       Date:  2012-07-09       Impact factor: 4.272

2.  Dynamic changes in genomic histone association and modification during activation of the ASNS and ATF3 genes by amino acid limitation.

Authors:  Mukundh N Balasubramanian; Jixiu Shan; Michael S Kilberg
Journal:  Biochem J       Date:  2013-01-01       Impact factor: 3.857

Review 3.  The RNA polymerase II CTD coordinates transcription and RNA processing.

Authors:  Jing-Ping Hsin; James L Manley
Journal:  Genes Dev       Date:  2012-10-01       Impact factor: 11.361

4.  Histone deacetylases and phosphorylated polymerase II C-terminal domain recruit Spt6 for cotranscriptional histone reassembly.

Authors:  Bala Bharathi Burugula; Célia Jeronimo; Rakesh Pathak; Jeffery W Jones; François Robert; Chhabi K Govind
Journal:  Mol Cell Biol       Date:  2014-09-02       Impact factor: 4.272

5.  DNA Topoisomerase Iα Affects the Floral Transition.

Authors:  Ximing Gong; Lisha Shen; Ya Zhi Peng; Yinbo Gan; Hao Yu
Journal:  Plant Physiol       Date:  2016-11-11       Impact factor: 8.340

6.  Threonine-4 of mammalian RNA polymerase II CTD is targeted by Polo-like kinase 3 and required for transcriptional elongation.

Authors:  Corinna Hintermair; Martin Heidemann; Frederic Koch; Nicolas Descostes; Marta Gut; Ivo Gut; Romain Fenouil; Pierre Ferrier; Andrew Flatley; Elisabeth Kremmer; Rob D Chapman; Jean-Christophe Andrau; Dirk Eick
Journal:  EMBO J       Date:  2012-05-01       Impact factor: 11.598

7.  The identification of putative RNA polymerase II C-terminal domain associated proteins in red and green algae.

Authors:  Chunlin Yang; Paul W Hager; John W Stiller
Journal:  Transcription       Date:  2014-12-10

8.  The RSC complex remodels nucleosomes in transcribed coding sequences and promotes transcription in Saccharomyces cerevisiae.

Authors:  Emily Biernat; Jeena Kinney; Kyle Dunlap; Christian Rizza; Chhabi K Govind
Journal:  Genetics       Date:  2021-04-15       Impact factor: 4.562

Review 9.  Regulation of alternative splicing by local histone modifications: potential roles for RNA-guided mechanisms.

Authors:  Hua-Lin Zhou; Guangbin Luo; Jo Ann Wise; Hua Lou
Journal:  Nucleic Acids Res       Date:  2013-09-29       Impact factor: 16.971

10.  The yeast prefoldin-like URI-orthologue Bud27 associates with the RSC nucleosome remodeler and modulates transcription.

Authors:  María Carmen Mirón-García; Ana Isabel Garrido-Godino; Verónica Martínez-Fernández; Antonio Fernández-Pevida; Abel Cuevas-Bermúdez; Manuel Martín-Expósito; Sebastián Chávez; Jesús de la Cruz; Francisco Navarro
Journal:  Nucleic Acids Res       Date:  2014-07-31       Impact factor: 16.971
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