Literature DB >> 16286008

Cotranscriptional set2 methylation of histone H3 lysine 36 recruits a repressive Rpd3 complex.

Michael-Christopher Keogh1, Siavash K Kurdistani, Stephanie A Morris, Seong Hoon Ahn, Vladimir Podolny, Sean R Collins, Maya Schuldiner, Kayu Chin, Thanuja Punna, Natalie J Thompson, Charles Boone, Andrew Emili, Jonathan S Weissman, Timothy R Hughes, Brian D Strahl, Michael Grunstein, Jack F Greenblatt, Stephen Buratowski, Nevan J Krogan.   

Abstract

The yeast histone deacetylase Rpd3 can be recruited to promoters to repress transcription initiation. Biochemical, genetic, and gene-expression analyses show that Rpd3 exists in two distinct complexes. The smaller complex, Rpd3C(S), shares Sin3 and Ume1 with Rpd3C(L) but contains the unique subunits Rco1 and Eaf3. Rpd3C(S) mutants exhibit phenotypes remarkably similar to those of Set2, a histone methyltransferase associated with elongating RNA polymerase II. Chromatin immunoprecipitation and biochemical experiments indicate that the chromodomain of Eaf3 recruits Rpd3C(S) to nucleosomes methylated by Set2 on histone H3 lysine 36, leading to deacetylation of transcribed regions. This pathway apparently acts to negatively regulate transcription because deleting the genes for Set2 or Rpd3C(S) bypasses the requirement for the positive elongation factor Bur1/Bur2.

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Year:  2005        PMID: 16286008     DOI: 10.1016/j.cell.2005.10.025

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  439 in total

1.  Regulation by polycomb and trithorax group proteins in Arabidopsis.

Authors:  Raúl Alvarez-Venegas
Journal:  Arabidopsis Book       Date:  2010-05-08

Review 2.  Understanding the language of Lys36 methylation at histone H3.

Authors:  Eric J Wagner; Phillip B Carpenter
Journal:  Nat Rev Mol Cell Biol       Date:  2012-01-23       Impact factor: 94.444

3.  The histone H3 Lys 27 demethylase JMJD3 regulates gene expression by impacting transcriptional elongation.

Authors:  Shuzhen Chen; Jian Ma; Feizhen Wu; Li-Jun Xiong; Honghui Ma; Wenqi Xu; Ruitu Lv; Xiaodong Li; Judit Villen; Steven P Gygi; Xiaole Shirley Liu; Yang Shi
Journal:  Genes Dev       Date:  2012-06-15       Impact factor: 11.361

4.  Histone H3 lysine 36 methylation targets the Isw1b remodeling complex to chromatin.

Authors:  Vicki E Maltby; Benjamin J E Martin; Julia M Schulze; Ian Johnson; Thomas Hentrich; Aishwariya Sharma; Michael S Kobor; LeAnn Howe
Journal:  Mol Cell Biol       Date:  2012-07-02       Impact factor: 4.272

5.  Activator-dependent p300 acetylation of chromatin in vitro: enhancement of transcription by disruption of repressive nucleosome-nucleosome interactions.

Authors:  Heather J Szerlong; Jessica E Prenni; Jennifer K Nyborg; Jeffrey C Hansen
Journal:  J Biol Chem       Date:  2010-08-18       Impact factor: 5.157

6.  Control of genic DNA methylation in Arabidopsis.

Authors:  Soichi Inagaki; Tetsuji Kakutani
Journal:  J Plant Res       Date:  2010-04-03       Impact factor: 2.629

7.  P-TEFb kinase complex phosphorylates histone H1 to regulate expression of cellular and HIV-1 genes.

Authors:  Siobhan K O'Brien; Hong Cao; Robin Nathans; Akbar Ali; Tariq M Rana
Journal:  J Biol Chem       Date:  2010-06-15       Impact factor: 5.157

Review 8.  Histone H2B ubiquitination and beyond: Regulation of nucleosome stability, chromatin dynamics and the trans-histone H3 methylation.

Authors:  Mahesh B Chandrasekharan; Fu Huang; Zu-Wen Sun
Journal:  Epigenetics       Date:  2010-08-16       Impact factor: 4.528

9.  The BUR1 cyclin-dependent protein kinase is required for the normal pattern of histone methylation by SET2.

Authors:  Yaya Chu; Ann Sutton; Rolf Sternglanz; Gregory Prelich
Journal:  Mol Cell Biol       Date:  2006-04       Impact factor: 4.272

10.  Methylation of histone H3 mediates the association of the NuA3 histone acetyltransferase with chromatin.

Authors:  David G E Martin; Daniel E Grimes; Kristin Baetz; LeAnn Howe
Journal:  Mol Cell Biol       Date:  2006-04       Impact factor: 4.272

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