Literature DB >> 21466861

The conserved disulfide bond of human tear lipocalin modulates conformation and lipid binding in a ligand selective manner.

Oktay K Gasymov1, Adil R Abduragimov, Ben J Glasgow.   

Abstract

The primary aim of this study is the elucidation of the mechanism of disulfide induced alteration of ligand binding in human tear lipocalin (TL). Disulfide bonds may act as dynamic scaffolds to regulate conformational changes that alter protein function including receptor-ligand interactions. A single disulfide bond, (Cys61-Cys153), exists in TL that is highly conserved in the lipocalin superfamily. Circular dichroism and fluorescence spectroscopies were applied to investigate the mechanism by which disulfide bond removal effects protein stability, dynamics and ligand binding properties. Although the secondary structure is not altered by disulfide elimination, TL shows decreased stability against urea denaturation. Free energy change (ΔG(0)) decreases from 4.9±0.2 to 2.1±0.3kcal/mol with removal of the disulfide bond. Furthermore, ligand binding properties of TL without the disulfide vary according to the type of ligand. The binding of a bulky ligand, NBD-cholesterol, has a decreased time constant (from 11.8±0.2 to 3.3s). In contrast, the NBD-labeled phospholipid shows a moderate decrease in the time constant for binding, from 33.2±0.2 to 22.2±0.4s. FRET experiments indicate that the hairpin CD is directly involved in modulation of both ligand binding and flexibility of TL. In TL complexed with palmitic acid (PA-TL), the distance between the residues 62 of strand D and 81 of loop EF is decreased by disulfide bond reduction. Consequently, removal of the disulfide bond boosts flexibility of the protein to reach a CD-EF loop distance (24.3Å, between residues 62 and 81), which is not accessible for the protein with an intact disulfide bond (26.2Å). The results suggest that enhanced flexibility of the protein promotes a faster accommodation of the ligand inside the cavity and an energetically favorable ligand-protein complex.
Copyright © 2011 Elsevier B.V. All rights reserved.

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Year:  2011        PMID: 21466861      PMCID: PMC3103136          DOI: 10.1016/j.bbapap.2011.03.017

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  57 in total

1.  Non-native alpha-helix formation is not necessary for folding of lipocalin: comparison of burst-phase folding between tear lipocalin and beta-lactoglobulin.

Authors:  Seiichi Tsukamoto; Takako Yamashita; Yoshiteru Yamada; Kazuo Fujiwara; Kosuke Maki; Kunihiro Kuwajima; Yoshitaka Matsumura; Hiroshi Kihara; Hideaki Tsuge; Masamichi Ikeguchi
Journal:  Proteins       Date:  2009-07

Review 2.  Extracellular disulfide exchange and the regulation of cellular function.

Authors:  Peter A Jordan; Jonathan M Gibbins
Journal:  Antioxid Redox Signal       Date:  2006 Mar-Apr       Impact factor: 8.401

3.  Effects of removing a conserved disulfide bond on the biological characteristics of rat lipocalin-type prostaglandin D synthase.

Authors:  Jiafu Liu; Chenyun Guo; Yihe Yao; Donghai Lin
Journal:  Biochimie       Date:  2008-06-12       Impact factor: 4.079

4.  Ligand binding site of tear lipocalin: contribution of a trigonal cluster of charged residues probed by 8-anilino-1-naphthalenesulfonic acid.

Authors:  Oktay K Gasymov; Adil R Abduragimov; Ben J Glasgow
Journal:  Biochemistry       Date:  2008-01-08       Impact factor: 3.162

5.  Fatty acids bound to recombinant tear lipocalin and their role in structural stabilization.

Authors:  Seiichi Tsukamoto; Kazuo Fujiwara; Masamichi Ikeguchi
Journal:  J Biochem       Date:  2009-05-26       Impact factor: 3.387

6.  Intracavitary ligand distribution in tear lipocalin by site-directed tryptophan fluorescence.

Authors:  Oktay K Gasymov; Adil R Abduragimov; Ben J Glasgow
Journal:  Biochemistry       Date:  2009-08-04       Impact factor: 3.162

7.  Site-directed circular dichroism of proteins: 1Lb bands of Trp resolve position-specific features in tear lipocalin.

Authors:  Oktay K Gasymov; Adil R Abduragimov; Ben J Glasgow
Journal:  Anal Biochem       Date:  2007-11-06       Impact factor: 3.365

8.  Oligomeric state of lipocalin-1 (LCN1) by multiangle laser light scattering and fluorescence anisotropy decay.

Authors:  Oktay K Gasymov; Adil R Abduragimov; Petra Merschak; Bernhard Redl; Ben J Glasgow
Journal:  Biochim Biophys Acta       Date:  2007-08-14

9.  Adsorption of human tear lipocalin to human meibomian lipid films.

Authors:  Thomas J Millar; Poonam Mudgil; Igor A Butovich; Chendur K Palaniappan
Journal:  Invest Ophthalmol Vis Sci       Date:  2008-08-29       Impact factor: 4.799

10.  Selective redox regulation of cytokine receptor signaling by extracellular thioredoxin-1.

Authors:  Ulla Schwertassek; Yves Balmer; Marcus Gutscher; Lars Weingarten; Marc Preuss; Johanna Engelhard; Monique Winkler; Tobias P Dick
Journal:  EMBO J       Date:  2007-06-07       Impact factor: 11.598

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  11 in total

1.  Effect of short- and long-range interactions on trp rotamer populations determined by site-directed tryptophan fluorescence of tear lipocalin.

Authors:  Oktay K Gasymov; Adil R Abduragimov; Ben J Glasgow
Journal:  PLoS One       Date:  2013-10-28       Impact factor: 3.240

2.  Cation-π interactions in lipocalins: structural and functional implications.

Authors:  Oktay K Gasymov; Adil R Abduragimov; Ben J Glasgow
Journal:  Biochemistry       Date:  2012-03-28       Impact factor: 3.162

3.  Double tryptophan exciton probe to gauge proximal side chains in proteins: augmentation at low temperature.

Authors:  Oktay K Gasymov; Adil R Abduragimov; Ben J Glasgow
Journal:  J Phys Chem B       Date:  2015-03-02       Impact factor: 2.991

4.  Exploring protein solution structure: Second moments of fluorescent spectra report heterogeneity of tryptophan rotamers.

Authors:  Oktay K Gasymov; Adil R Abduragimov; Ben J Glasgow
Journal:  Spectrochim Acta A Mol Biomol Spectrosc       Date:  2015-06-19       Impact factor: 4.098

5.  A simple model-free method for direct assessment of fluorescent ligand binding by linear spectral summation.

Authors:  Oktay K Gasymov; Adil R Abduragimov; Ben J Glasgow
Journal:  J Fluoresc       Date:  2013-09-18       Impact factor: 2.217

6.  A novel fluorescent lipid probe for dry eye: retrieval by tear lipocalin in humans.

Authors:  Po-Ting Yeh; Richard Casey; Ben J Glasgow
Journal:  Invest Ophthalmol Vis Sci       Date:  2013-02-19       Impact factor: 4.799

7.  Interaction of ceramides and tear lipocalin.

Authors:  Ben J Glasgow; Adil R Abduragimov
Journal:  Biochim Biophys Acta Mol Cell Biol Lipids       Date:  2018-01-11       Impact factor: 4.698

8.  Antibacterial activity of rifamycins for M. smegmatis with comparison of oxidation and binding to tear lipocalin.

Authors:  Tamara Staudinger; Bernhard Redl; Ben J Glasgow
Journal:  Biochim Biophys Acta       Date:  2014-02-12

9.  Restoration of structural stability and ligand binding after removal of the conserved disulfide bond in tear lipocalin.

Authors:  Oktay K Gasymov; Adil R Abduragimov; Ben J Glasgow
Journal:  Biochem Biophys Res Commun       Date:  2014-09-16       Impact factor: 3.575

10.  Probing tertiary structure of proteins using single Trp mutations with circular dichroism at low temperature.

Authors:  Oktay K Gasymov; Adil R Abduragimov; Ben J Glasgow
Journal:  J Phys Chem B       Date:  2014-01-17       Impact factor: 2.991

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