Literature DB >> 18179255

Ligand binding site of tear lipocalin: contribution of a trigonal cluster of charged residues probed by 8-anilino-1-naphthalenesulfonic acid.

Oktay K Gasymov1, Adil R Abduragimov, Ben J Glasgow.   

Abstract

Human tear lipocalin (TL) exhibits diverse functions, most of which are linked to ligand binding. To map the binding site of TL for some amphiphilic ligands, we capitalized on the hydrophobic and hydrophilic properties of 8-anilino-1-naphthalenesulfonic acid (ANS). In single Trp mutants, resonance energy transfer from Trp to ANS indicates that the naphthalene group of ANS is proximate to Leu105 in the cavity. Binding energies of TL to ANS and its analogues reveal contributions from electrostatic interactions. The sulfonate group of ANS interacts strongly with the nonconserved intracavitary residue Lys114 and less with neighboring residues His84 and Glu34. This trigonal cluster of residues may play a role in the ligand recognition site for some negatively charged ligands. Because many drugs possess sulfonate groups, the trigonal cluster-sulfonate interaction can also be exploited as a lipocalin-based drug delivery mechanism. The binding of lauric acid and its analogues shows that fatty acids assume heterogeneous orientations in the cavity of TL. Predominantly, the hydrocarbon tail is buried in the cavity of TL and the carboxyl group is oriented toward the mouth. However, TL can also interact, albeit relatively weakly, with fatty acids oriented in the opposite direction. As the major lipid binding protein of tears, the ability to accommodate fatty acids in two opposing orientations may have functional implications for TL. At the aqueous-lipid interface, fatty acids whose carboxyl groups are positioned toward the aqueous phase are available for interaction with TL that could augment stability of the tear film.

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Year:  2008        PMID: 18179255      PMCID: PMC2873144          DOI: 10.1021/bi701955e

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  49 in total

1.  Duocalins: engineered ligand-binding proteins with dual specificity derived from the lipocalin fold.

Authors:  S Schlehuber; A Skerra
Journal:  Biol Chem       Date:  2001-09       Impact factor: 3.915

2.  Vitamin E associated with the lipocalin fraction of human tears.

Authors:  Ben J Glasgow; Adil R Abduragimov; Oktay K Gassymov; Taleh N Yusifov; Edward C Ruth; Kym F Faull
Journal:  Adv Exp Med Biol       Date:  2002       Impact factor: 2.622

3.  The role of lipocalin in determining the physical properties of tears.

Authors:  John M Tiffany; Beatrix Nagyová
Journal:  Adv Exp Med Biol       Date:  2002       Impact factor: 2.622

Review 4.  The lipid layer of tears: dependent on meibomian gland function.

Authors:  James P McCulley; Ward E Shine
Journal:  Exp Eye Res       Date:  2004-03       Impact factor: 3.467

5.  Characterization of fluorescence of ANS-tear lipocalin complex: evidence for multiple-binding modes.

Authors:  Oktay K Gasymov; Adil R Abduragimov; Ben J Glasgow
Journal:  Photochem Photobiol       Date:  2007 Nov-Dec       Impact factor: 3.421

6.  Site-directed tryptophan fluorescence reveals the solution structure of tear lipocalin: evidence for features that confer promiscuity in ligand binding.

Authors:  O K Gasymov; A R Abduragimov; T N Yusifov; B J Glasgow
Journal:  Biochemistry       Date:  2001-12-11       Impact factor: 3.162

Review 7.  Lipocalins as a scaffold.

Authors:  A Skerra
Journal:  Biochim Biophys Acta       Date:  2000-10-18

8.  Human lipocalin-1, a physiological scavenger of lipophilic compounds, is produced by corticotrophs of the pituitary gland.

Authors:  Petra Wojnar; Stephan Dirnhofer; Peter Ladurner; Peter Berger; Bernhard Redl
Journal:  J Histochem Cytochem       Date:  2002-03       Impact factor: 2.479

Review 9.  Functional aspects of the tear film lipid layer.

Authors:  A J Bron; J M Tiffany; S M Gouveia; N Yokoi; L W Voon
Journal:  Exp Eye Res       Date:  2004-03       Impact factor: 3.467

10.  Competitive binding of fatty acids and the fluorescent probe 1-8-anilinonaphthalene sulfonate to bovine beta-lactoglobulin.

Authors:  Maddalena Collini; Laura D'Alfonso; Henriette Molinari; Laura Ragona; Maddalena Catalano; Giancarlo Baldini
Journal:  Protein Sci       Date:  2003-08       Impact factor: 6.725

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  12 in total

1.  Excited protein states of human tear lipocalin for low- and high-affinity ligand binding revealed by functional AB loop motion.

Authors:  Oktay K Gasymov; Adil R Abduragimov; Ben J Glasgow
Journal:  Biophys Chem       Date:  2010-04-09       Impact factor: 2.352

2.  Cation-π interactions in lipocalins: structural and functional implications.

Authors:  Oktay K Gasymov; Adil R Abduragimov; Ben J Glasgow
Journal:  Biochemistry       Date:  2012-03-28       Impact factor: 3.162

3.  The conserved disulfide bond of human tear lipocalin modulates conformation and lipid binding in a ligand selective manner.

Authors:  Oktay K Gasymov; Adil R Abduragimov; Ben J Glasgow
Journal:  Biochim Biophys Acta       Date:  2011-04-03

4.  A simple model-free method for direct assessment of fluorescent ligand binding by linear spectral summation.

Authors:  Oktay K Gasymov; Adil R Abduragimov; Ben J Glasgow
Journal:  J Fluoresc       Date:  2013-09-18       Impact factor: 2.217

5.  Tear lipocalin captures exogenous lipid from abnormal corneal surfaces.

Authors:  Ben J Glasgow; Oktay K Gasymov; Adil R Abduragimov; Jamison J Engle; Richard C Casey
Journal:  Invest Ophthalmol Vis Sci       Date:  2009-12-03       Impact factor: 4.799

Review 6.  Tear film lipids.

Authors:  Igor A Butovich
Journal:  Exp Eye Res       Date:  2013-06-12       Impact factor: 3.467

7.  Interaction of ceramides and tear lipocalin.

Authors:  Ben J Glasgow; Adil R Abduragimov
Journal:  Biochim Biophys Acta Mol Cell Biol Lipids       Date:  2018-01-11       Impact factor: 4.698

8.  Intracavitary ligand distribution in tear lipocalin by site-directed tryptophan fluorescence.

Authors:  Oktay K Gasymov; Adil R Abduragimov; Ben J Glasgow
Journal:  Biochemistry       Date:  2009-08-04       Impact factor: 3.162

9.  Antibacterial activity of rifamycins for M. smegmatis with comparison of oxidation and binding to tear lipocalin.

Authors:  Tamara Staudinger; Bernhard Redl; Ben J Glasgow
Journal:  Biochim Biophys Acta       Date:  2014-02-12

10.  Adsorption of human tear lipocalin to human meibomian lipid films.

Authors:  Thomas J Millar; Poonam Mudgil; Igor A Butovich; Chendur K Palaniappan
Journal:  Invest Ophthalmol Vis Sci       Date:  2008-08-29       Impact factor: 4.799

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