Literature DB >> 21464825

Molecular aspects of bacterial pH sensing and homeostasis.

Terry A Krulwich1, George Sachs, Etana Padan.   

Abstract

Diverse mechanisms for pH sensing and cytoplasmic pH homeostasis enable most bacteria to tolerate or grow at external pH values that are outside the cytoplasmic pH range they must maintain for growth. The most extreme cases are exemplified by the extremophiles that inhabit environments with a pH of below 3 or above 11. Here, we describe how recent insights into the structure and function of key molecules and their regulators reveal novel strategies of bacterial pH homeostasis. These insights may help us to target certain pathogens more accurately and to harness the capacities of environmental bacteria more efficiently.

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Year:  2011        PMID: 21464825      PMCID: PMC3247762          DOI: 10.1038/nrmicro2549

Source DB:  PubMed          Journal:  Nat Rev Microbiol        ISSN: 1740-1526            Impact factor:   60.633


  144 in total

1.  Enterococcus hirae vacuolar ATPase is expressed in response to pH as well as sodium.

Authors:  M Ikegami; M Kawano; K Takase; I Yamato; K Igarashi; Y Kakinuma
Journal:  FEBS Lett       Date:  1999-07-02       Impact factor: 4.124

Review 2.  pH homeostasis in acidophiles.

Authors:  A Matin
Journal:  Novartis Found Symp       Date:  1999

Review 3.  Energetic problems faced by micro-organisms growing or surviving on parsimonious energy sources and at acidic pH: I. Acidithiobacillus ferrooxidans as a paradigm.

Authors:  Stuart J Ferguson; W John Ingledew
Journal:  Biochim Biophys Acta       Date:  2008-09-16

4.  Gene expression in vivo shows that Helicobacter pylori colonizes an acidic niche on the gastric surface.

Authors:  David R Scott; Elizabeth A Marcus; Yi Wen; Jane Oh; George Sachs
Journal:  Proc Natl Acad Sci U S A       Date:  2007-04-16       Impact factor: 11.205

5.  The ATP synthase a-subunit of extreme alkaliphiles is a distinct variant: mutations in the critical alkaliphile-specific residue Lys-180 and other residues that support alkaliphile oxidative phosphorylation.

Authors:  Makoto Fujisawa; Oliver J Fackelmayer; Jun Liu; Terry A Krulwich; David B Hicks
Journal:  J Biol Chem       Date:  2010-08-17       Impact factor: 5.157

6.  pH-dependent expression of periplasmic proteins and amino acid catabolism in Escherichia coli.

Authors:  Lauren M Stancik; Dawn M Stancik; Brian Schmidt; D Michael Barnhart; Yuliya N Yoncheva; Joan L Slonczewski
Journal:  J Bacteriol       Date:  2002-08       Impact factor: 3.490

7.  The MrpA, MrpB and MrpD subunits of the Mrp antiporter complex in Bacillus subtilis contain membrane-embedded and essential acidic residues.

Authors:  Yusuke Kajiyama; Masato Otagiri; Junichi Sekiguchi; Toshiaki Kudo; Saori Kosono
Journal:  Microbiology       Date:  2009-04-23       Impact factor: 2.777

8.  Proton/sodium ion antiport in Escherichia coli.

Authors:  I C West; P Mitchell
Journal:  Biochem J       Date:  1974-10       Impact factor: 3.857

9.  Anticipating an alkaline stress through the Tor phosphorelay system in Escherichia coli.

Authors:  Christophe Bordi; Laurence Théraulaz; Vincent Méjean; Cécile Jourlin-Castelli
Journal:  Mol Microbiol       Date:  2003-04       Impact factor: 3.501

10.  Acidithiobacillus ferrooxidans metabolism: from genome sequence to industrial applications.

Authors:  Jorge Valdés; Inti Pedroso; Raquel Quatrini; Robert J Dodson; Herve Tettelin; Robert Blake; Jonathan A Eisen; David S Holmes
Journal:  BMC Genomics       Date:  2008-12-11       Impact factor: 3.969

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  264 in total

1.  Genome of alkaliphilic Bacillus pseudofirmus OF4 reveals adaptations that support the ability to grow in an external pH range from 7.5 to 11.4.

Authors:  Benjamin Janto; Azad Ahmed; Masahiro Ito; Jun Liu; David B Hicks; Sarah Pagni; Oliver J Fackelmayer; Terry-Ann Smith; Joshua Earl; Liam D H Elbourne; Karl Hassan; Ian T Paulsen; Anne-Brit Kolstø; Nicolas J Tourasse; Garth D Ehrlich; Robert Boissy; D Mack Ivey; Gang Li; Yanfen Xue; Yanhe Ma; Fen Z Hu; Terry A Krulwich
Journal:  Environ Microbiol       Date:  2011-09-27       Impact factor: 5.491

2.  NhaA antiporter functions using 10 helices, and an additional 2 contribute to assembly/stability.

Authors:  Etana Padan; Tsafi Danieli; Yael Keren; Dudu Alkoby; Gal Masrati; Turkan Haliloglu; Nir Ben-Tal; Abraham Rimon
Journal:  Proc Natl Acad Sci U S A       Date:  2015-09-28       Impact factor: 11.205

3.  Plasticity of Escherichia coli cell wall metabolism promotes fitness and antibiotic resistance across environmental conditions.

Authors:  Elizabeth A Mueller; Alexander Jf Egan; Eefjan Breukink; Waldemar Vollmer; Petra Anne Levin
Journal:  Elife       Date:  2019-04-09       Impact factor: 8.140

4.  Anaerobic growth of Corynebacterium glutamicum via mixed-acid fermentation.

Authors:  Andrea Michel; Abigail Koch-Koerfges; Karin Krumbach; Melanie Brocker; Michael Bott
Journal:  Appl Environ Microbiol       Date:  2015-08-14       Impact factor: 4.792

Review 5.  Nature and bioprospecting of haloalkaliphilics: a review.

Authors:  Ganapathi Uma; Mariavincent Michael Babu; Vincent Samuel Gnana Prakash; Selvaraj Jeraldin Nisha; Thavasimuthu Citarasu
Journal:  World J Microbiol Biotechnol       Date:  2020-04-23       Impact factor: 3.312

6.  Structure of an Ancient Respiratory System.

Authors:  Hongjun Yu; Chang-Hao Wu; Gerrit J Schut; Dominik K Haja; Gongpu Zhao; John W Peters; Michael W W Adams; Huilin Li
Journal:  Cell       Date:  2018-05-10       Impact factor: 41.582

7.  A pH-Dependent Gene Expression Enables Bacillus amyloliquefaciens MBNC to Adapt to Acid Stress.

Authors:  Naimisha Chowdhury; Gunajit Goswami; Robin Chandra Boro; Madhumita Barooah
Journal:  Curr Microbiol       Date:  2021-06-26       Impact factor: 2.188

8.  Escherichia coli YqjA, a Member of the Conserved DedA/Tvp38 Membrane Protein Family, Is a Putative Osmosensing Transporter Required for Growth at Alkaline pH.

Authors:  Sujeet Kumar; William T Doerrler
Journal:  J Bacteriol       Date:  2015-04-27       Impact factor: 3.490

9.  The bacterial lipid II flippase MurJ functions by an alternating-access mechanism.

Authors:  Sujeet Kumar; Frederick A Rubino; Alicia G Mendoza; Natividad Ruiz
Journal:  J Biol Chem       Date:  2018-11-27       Impact factor: 5.157

10.  In Vitro Community Synergy between Bacterial Soil Isolates Can Be Facilitated by pH Stabilization of the Environment.

Authors:  Jakob Herschend; Klaus Koren; Henriette L Røder; Asker Brejnrod; Michael Kühl; Mette Burmølle
Journal:  Appl Environ Microbiol       Date:  2018-10-17       Impact factor: 4.792

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