Literature DB >> 21460087

Genome sequence of strain TW25, a novel member of the genus Ornithinibacillus in the family Bacillaceae.

Tae Woong Whon1, Seong Woon Roh, Na-Ri Shin, Min-Soo Kim, Young-Ok Kim, Jin-Woo Bae.   

Abstract

Ornithinibacillus sp. strain TW25, belonging to the family Bacillaceae, was isolated from a dead ark clam during a mass mortality event. Here, the draft genome sequence of strain TW25 (3,843,870 bp, with a G+C content of 36.7%) is reported. This is the first Ornithinibacillus genome to be sequenced.

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Year:  2011        PMID： 21460087      PMCID： PMC3133138          DOI： 10.1128/JB.00308-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  10 in total

1.  Identifying bacterial genes and endosymbiont DNA with Glimmer.

Authors:  Arthur L Delcher; Kirsten A Bratke; Edwin C Powers; Steven L Salzberg
Journal:  Bioinformatics       Date:  2007-01-19       Impact factor: 6.937

2.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

3.  Ornithinibacillus gen. nov., with the species Ornithinibacillus bavariensis sp. nov. and Ornithinibacillus californiensis sp. nov.

Authors:  R Mayr; H-J Busse; H L Worliczek; M Ehling-Schulz; S Scherer
Journal:  Int J Syst Evol Microbiol       Date:  2006-06       Impact factor: 2.747

4.  Ornithine cyclase (deaminating). Purification of a protein that converts ornithine to proline and definition of the optimal assay conditions.

Authors:  R N Costilow; L Laycock
Journal:  J Biol Chem       Date:  1971-11       Impact factor: 5.157

Review 5.  Biosynthesis and metabolism of arginine in bacteria.

Authors:  R Cunin; N Glansdorff; A Piérard; V Stalon
Journal:  Microbiol Rev       Date:  1986-09

6.  Genome sequence of Oceanobacillus iheyensis isolated from the Iheya Ridge and its unexpected adaptive capabilities to extreme environments.

Authors:  Hideto Takami; Yoshihiro Takaki; Ikuo Uchiyama
Journal:  Nucleic Acids Res       Date:  2002-09-15       Impact factor: 16.971

7.  Properties of crystalline L-ornithine: alpha-ketoglutarate delta-aminotransferase from Bacillus sphaericus.

Authors:  M Yasuda; K Tanizawa; H Misono; S Toyama; K Soda
Journal:  J Bacteriol       Date:  1981-10       Impact factor: 3.490

8.  Ornithinibacillus contaminans sp. nov., an endospore-forming species.

Authors:  P Kämpfer; E Falsen; N Lodders; S Langer; H-J Busse; P Schumann
Journal:  Int J Syst Evol Microbiol       Date:  2010-01-29       Impact factor: 2.747

9.  RNAmmer: consistent and rapid annotation of ribosomal RNA genes.

Authors:  Karin Lagesen; Peter Hallin; Einar Andreas Rødland; Hans-Henrik Staerfeldt; Torbjørn Rognes; David W Ussery
Journal:  Nucleic Acids Res       Date:  2007-04-22       Impact factor: 16.971

10.  The RAST Server: rapid annotations using subsystems technology.

Authors:  Ramy K Aziz; Daniela Bartels; Aaron A Best; Matthew DeJongh; Terrence Disz; Robert A Edwards; Kevin Formsma; Svetlana Gerdes; Elizabeth M Glass; Michael Kubal; Folker Meyer; Gary J Olsen; Robert Olson; Andrei L Osterman; Ross A Overbeek; Leslie K McNeil; Daniel Paarmann; Tobias Paczian; Bruce Parrello; Gordon D Pusch; Claudia Reich; Rick Stevens; Olga Vassieva; Veronika Vonstein; Andreas Wilke; Olga Zagnitko
Journal:  BMC Genomics       Date:  2008-02-08       Impact factor: 3.969
  10 in total

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