Literature DB >> 21460084

Genome sequence of "Pedosphaera parvula" Ellin514, an aerobic Verrucomicrobial isolate from pasture soil.

Ravi Kant1, Mark W J van Passel, Parveen Sangwan, Airi Palva, Susan Lucas, Alex Copeland, Alla Lapidus, Tijana Glavina del Rio, Eileen Dalin, Hope Tice, David Bruce, Lynne Goodwin, Sam Pitluck, Olga Chertkov, Frank W Larimer, Miriam L Land, Loren Hauser, Thomas S Brettin, John C Detter, Shunsheng Han, Willem M de Vos, Peter H Janssen, Hauke Smidt.   

Abstract

"Pedosphaera parvula" Ellin514 is an aerobically grown verrucomicrobial isolate from pasture soil. It is one of the few cultured representatives of subdivision 3 of the phylum Verrucomicrobia. Members of this group are widespread in terrestrial environments.

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Year:  2011        PMID： 21460084      PMCID： PMC3133123          DOI： 10.1128/JB.00299-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  9 in total

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6.  The genome of Akkermansia muciniphila, a dedicated intestinal mucin degrader, and its use in exploring intestinal metagenomes.

Authors:  Mark W J van Passel; Ravi Kant; Erwin G Zoetendal; Caroline M Plugge; Muriel Derrien; Stephanie A Malfatti; Patrick S G Chain; Tanja Woyke; Airi Palva; Willem M de Vos; Hauke Smidt
Journal:  PLoS One       Date:  2011-03-03       Impact factor: 3.240

7.  Phylum Verrucomicrobia representatives share a compartmentalized cell plan with members of bacterial phylum Planctomycetes.

Authors:  Kuo-Chang Lee; Richard I Webb; Peter H Janssen; Parveen Sangwan; Tony Romeo; James T Staley; John A Fuerst
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Journal:  Nucleic Acids Res       Date:  2006-01-01       Impact factor: 16.971

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  9 in total
  11 in total

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2.  Distinct Anaerobic Bacterial Consumers of Cellobiose-Derived Carbon in Boreal Fens with Different CO2/CH4 Production Ratios.

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4.  Molecular Signatures for the PVC Clade (Planctomycetes, Verrucomicrobia, Chlamydiae, and Lentisphaerae) of Bacteria Provide Insights into Their Evolutionary Relationships.

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6.  Inhibition of the growth of Bacillus subtilis DSM10 by a newly discovered antibacterial protein from the soil metagenome.

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7.  Reconstruction of Diverse Verrucomicrobial Genomes from Metagenome Datasets of Freshwater Reservoirs.

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10.  Forest-to-pasture conversion increases the diversity of the phylum Verrucomicrobia in Amazon rainforest soils.

Authors:  Kshitij Ranjan; Fabiana S Paula; Rebecca C Mueller; Ederson da C Jesus; Karina Cenciani; Brendan J M Bohannan; Klaus Nüsslein; Jorge L M Rodrigues
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