Literature DB >> 21456967

Class I ribonucleotide reductases: metallocofactor assembly and repair in vitro and in vivo.

Joseph A Cotruvo1, Joanne Stubbe.   

Abstract

Incorporation of metallocofactors essential for the activity of many enyzmes is a major mechanism of posttranslational modification. The cellular machinery required for these processes in the case of mono- and dinuclear nonheme iron and manganese cofactors has remained largely elusive. In addition, many metallocofactors can be converted to inactive forms, and pathways for their repair have recently come to light. The class I ribonucleotide reductases (RNRs) catalyze the conversion of nucleotides to deoxynucleotides and require dinuclear metal clusters for activity: an Fe(III)Fe(III)-tyrosyl radical (Y•) cofactor (class Ia), a Mn(III)Mn(III)-Y• cofactor (class Ib), and a Mn(IV)Fe(III) cofactor (class Ic). The class Ia, Ib, and Ic RNRs are structurally homologous and contain almost identical metal coordination sites. Recent progress in our understanding of the mechanisms by which the cofactor of each of these RNRs is generated in vitro and in vivo and by which the damaged cofactors are repaired is providing insight into how nature prevents mismetallation and orchestrates active cluster formation in high yields.

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Year:  2011        PMID: 21456967      PMCID: PMC4703083          DOI: 10.1146/annurev-biochem-061408-095817

Source DB:  PubMed          Journal:  Annu Rev Biochem        ISSN: 0066-4154            Impact factor:   23.643


  148 in total

1.  Regulation of ribonucleotide reductase by Spd1 involves multiple mechanisms.

Authors:  Konstantinos Nestoras; Asma Hadi Mohammed; Ann-Sofie Schreurs; Oliver Fleck; Adam T Watson; Marius Poitelea; Charlotte O'Shea; Charly Chahwan; Christian Holmberg; Birthe B Kragelund; Olaf Nielsen; Mark Osborne; Antony M Carr; Cong Liu
Journal:  Genes Dev       Date:  2010-06-01       Impact factor: 11.361

2.  Rnr4p, a novel ribonucleotide reductase small-subunit protein.

Authors:  P J Wang; A Chabes; R Casagrande; X C Tian; L Thelander; T C Huffaker
Journal:  Mol Cell Biol       Date:  1997-10       Impact factor: 4.272

3.  (Mu-1,2-peroxo)diiron(III/III) complex as a precursor to the diiron(III/IV) intermediate X in the assembly of the iron-radical cofactor of ribonucleotide reductase from mouse.

Authors:  Danny Yun; Ricardo García-Serres; Brandon M Chicalese; Young H An; Boi Hanh Huynh; J Martin Bollinger
Journal:  Biochemistry       Date:  2007-01-27       Impact factor: 3.162

4.  Crystal structures of the methane monooxygenase hydroxylase from Methylococcus capsulatus (Bath): implications for substrate gating and component interactions.

Authors:  A C Rosenzweig; H Brandstetter; D A Whittington; P Nordlund; S J Lippard; C A Frederick
Journal:  Proteins       Date:  1997-10

5.  Why multiple small subunits (Y2 and Y4) for yeast ribonucleotide reductase? Toward understanding the role of Y4.

Authors:  J Ge; D L Perlstein; H H Nguyen; G Bar; R G Griffin; J Stubbe
Journal:  Proc Natl Acad Sci U S A       Date:  2001-08-28       Impact factor: 11.205

6.  Yeast ribonucleotide reductase has a heterodimeric iron-radical-containing subunit.

Authors:  A Chabes; V Domkin; G Larsson; A Liu; A Graslund; S Wijmenga; L Thelander
Journal:  Proc Natl Acad Sci U S A       Date:  2000-03-14       Impact factor: 11.205

7.  Revisiting the mechanism of dioxygen activation in soluble methane monooxygenase from M. capsulatus (Bath): evidence for a multi-step, proton-dependent reaction pathway.

Authors:  Christine E Tinberg; Stephen J Lippard
Journal:  Biochemistry       Date:  2009-12-29       Impact factor: 3.162

8.  YfaE, a ferredoxin involved in diferric-tyrosyl radical maintenance in Escherichia coli ribonucleotide reductase.

Authors:  Chia-Hung Wu; Wei Jiang; Carsten Krebs; JoAnne Stubbe
Journal:  Biochemistry       Date:  2007-09-20       Impact factor: 3.162

9.  A cytosolic iron chaperone that delivers iron to ferritin.

Authors:  Haifeng Shi; Krisztina Z Bencze; Timothy L Stemmler; Caroline C Philpott
Journal:  Science       Date:  2008-05-30       Impact factor: 47.728

10.  Function and regulation of class I ribonucleotide reductase-encoding genes in mycobacteria.

Authors:  Mohube B Mowa; Digby F Warner; Gilla Kaplan; Bavesh D Kana; Valerie Mizrahi
Journal:  J Bacteriol       Date:  2008-11-21       Impact factor: 3.490

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  91 in total

1.  Proton Coupled Electron Transfer and Redox Active Tyrosines: Structure and Function of the Tyrosyl Radicals in Ribonucleotide Reductase and Photosystem II.

Authors:  Bridgette A Barry; Jun Chen; James Keough; David Jenson; Adam Offenbacher; Cynthia Pagba
Journal:  J Phys Chem Lett       Date:  2012-02-08       Impact factor: 6.475

2.  Investigation of in vivo diferric tyrosyl radical formation in Saccharomyces cerevisiae Rnr2 protein: requirement of Rnr4 and contribution of Grx3/4 AND Dre2 proteins.

Authors:  Yan Zhang; Lili Liu; Xiaorong Wu; Xiuxiang An; JoAnne Stubbe; Mingxia Huang
Journal:  J Biol Chem       Date:  2011-09-19       Impact factor: 5.157

3.  A comparison of two-electron chemistry performed by the manganese and iron heterodimer and homodimers.

Authors:  Katarina Roos; Per E M Siegbahn
Journal:  J Biol Inorg Chem       Date:  2011-11-15       Impact factor: 3.358

4.  Unsymmetrical bimetallic complexes with M(II)-(μ-OH)-M(III) cores (M(II)M(III) = Fe(II)Fe(III), Mn(II)Fe(III), Mn(II)Mn(III)): structural, magnetic, and redox properties.

Authors:  Yohei Sano; Andrew C Weitz; Joseph W Ziller; Michael P Hendrich; A S Borovik
Journal:  Inorg Chem       Date:  2013-08-30       Impact factor: 5.165

Review 5.  Dioxygen Activation by Nonheme Diiron Enzymes: Diverse Dioxygen Adducts, High-Valent Intermediates, and Related Model Complexes.

Authors:  Andrew J Jasniewski; Lawrence Que
Journal:  Chem Rev       Date:  2018-02-05       Impact factor: 60.622

6.  The diferric-tyrosyl radical cluster of ribonucleotide reductase and cytosolic iron-sulfur clusters have distinct and similar biogenesis requirements.

Authors:  Haoran Li; Martin Stümpfig; Caiguo Zhang; Xiuxiang An; JoAnne Stubbe; Roland Lill; Mingxia Huang
Journal:  J Biol Chem       Date:  2017-05-17       Impact factor: 5.157

7.  The class Ib ribonucleotide reductase from Mycobacterium tuberculosis has two active R2F subunits.

Authors:  Marta Hammerstad; Asmund K Røhr; Niels H Andersen; Astrid Gräslund; Martin Högbom; K Kristoffer Andersson
Journal:  J Biol Inorg Chem       Date:  2014-03-02       Impact factor: 3.358

Review 8.  Assembly of nonheme Mn/Fe active sites in heterodinuclear metalloproteins.

Authors:  Julia J Griese; Vivek Srinivas; Martin Högbom
Journal:  J Biol Inorg Chem       Date:  2014-04-26       Impact factor: 3.358

9.  Investigation of in vivo roles of the C-terminal tails of the small subunit (ββ') of Saccharomyces cerevisiae ribonucleotide reductase: contribution to cofactor formation and intersubunit association within the active holoenzyme.

Authors:  Yan Zhang; Xiuxiang An; Joanne Stubbe; Mingxia Huang
Journal:  J Biol Chem       Date:  2013-03-25       Impact factor: 5.157

10.  Mechanistic studies of the spore photoproduct lyase via a single cysteine mutation.

Authors:  Linlin Yang; Gengjie Lin; Renae S Nelson; Yajun Jian; Joshua Telser; Lei Li
Journal:  Biochemistry       Date:  2012-08-31       Impact factor: 3.162

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