Literature DB >> 21454649

Structure-function analysis of the bacterial expansin EXLX1.

Nikolaos Georgelis1, Akira Tabuchi, Nikolas Nikolaidis, Daniel J Cosgrove.   

Abstract

We made use of EXLX1, an expansin from Bacillus subtilis, to investigate protein features essential for its plant cell wall binding and wall loosening activities. We found that the two expansin domains, D1 and D2, need to be linked for wall extension activity and that D2 mediates EXLX1 binding to whole cell walls and to cellulose via distinct residues on the D2 surface. Binding to cellulose is mediated by three aromatic residues arranged linearly on the putative binding surface that spans D1 and D2. Mutation of these three residues to alanine eliminated cellulose binding and concomitantly eliminated wall loosening activity measured either by cell wall extension or by weakening of filter paper but hardly affected binding to whole cell walls, which is mediated by basic residues located on other D2 surfaces. Mutation of these basic residues to glutamine reduced cell wall binding but not wall loosening activities. We propose domain D2 as the founding member of a new carbohydrate binding module family, CBM63, but its function in expansin activity apparently goes beyond simply anchoring D1 to the wall. Several polar residues on the putative binding surface of domain D1 are also important for activity, most notably Asp82, whose mutation to alanine or asparagine completely eliminated wall loosening activity. The functional insights based on this bacterial expansin may be extrapolated to the interactions of plant expansins with cell walls.

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Year:  2011        PMID: 21454649      PMCID: PMC3089525          DOI: 10.1074/jbc.M111.225037

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  72 in total

1.  Importance of the carbohydrate-binding module of Clostridium stercorarium Xyn10B to xylan hydrolysis.

Authors:  M K Ali; H Hayashi; S Karita; M Goto; T Kimura; K Sakka; K Ohmiya
Journal:  Biosci Biotechnol Biochem       Date:  2001-01       Impact factor: 2.043

2.  Regulation of expansin gene expression affects growth and development in transgenic rice plants.

Authors:  Dongsu Choi; Yi Lee; Hyung-Taeg Cho; Hans Kende
Journal:  Plant Cell       Date:  2003-06       Impact factor: 11.277

3.  DICHROWEB, an online server for protein secondary structure analyses from circular dichroism spectroscopic data.

Authors:  Lee Whitmore; B A Wallace
Journal:  Nucleic Acids Res       Date:  2004-07-01       Impact factor: 16.971

Review 4.  Lytic transglycosylases: bacterial space-making autolysins.

Authors:  Edie Scheurwater; Chris W Reid; Anthony J Clarke
Journal:  Int J Biochem Cell Biol       Date:  2007-03-30       Impact factor: 5.085

5.  Role of scaffolding protein CipC of Clostridium cellulolyticum in cellulose degradation.

Authors:  S Pagès; L Gal; A Bélaïch; C Gaudin; C Tardif; J P Bélaïch
Journal:  J Bacteriol       Date:  1997-05       Impact factor: 3.490

6.  The binding pattern of two carbohydrate-binding modules of laminarinase Lam16A from Thermotoga neapolitana: differences in beta-glucan binding within family CBM4.

Authors:  Vladimir V Zverlov; Ilia Y Volkov; Galina A Velikodvorskaya; Wolfgang H Schwarz
Journal:  Microbiology       Date:  2001-03       Impact factor: 2.777

7.  Modification of expansin transcript levels in the maize primary root at low water potentials.

Authors:  Y Wu; E T Thorne; R E Sharp; D J Cosgrove
Journal:  Plant Physiol       Date:  2001-08       Impact factor: 8.340

8.  Probing expansin action using cellulose/hemicellulose composites.

Authors:  S E Whitney; M J Gidley; S J McQueen-Mason
Journal:  Plant J       Date:  2000-05       Impact factor: 6.417

9.  Precise excision of the cellulose binding domains from two Cellulomonas fimi cellulases by a homologous protease and the effect on catalysis.

Authors:  N R Gilkes; R A Warren; R C Miller; D G Kilburn
Journal:  J Biol Chem       Date:  1988-07-25       Impact factor: 5.157

10.  Role of Ser216 in the mechanism of action of membrane-bound lytic transglycosylase B: further evidence for substrate-assisted catalysis.

Authors:  Christopher W Reid; Blaine A Legaree; Anthony J Clarke
Journal:  FEBS Lett       Date:  2007-09-29       Impact factor: 4.124

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  28 in total

Review 1.  Bacterial expansins and related proteins from the world of microbes.

Authors:  Nikolaos Georgelis; Nikolas Nikolaidis; Daniel J Cosgrove
Journal:  Appl Microbiol Biotechnol       Date:  2015-04-02       Impact factor: 4.813

2.  Sensitivity-enhanced solid-state NMR detection of expansin's target in plant cell walls.

Authors:  Tuo Wang; Yong Bum Park; Marc A Caporini; Melanie Rosay; Linghao Zhong; Daniel J Cosgrove; Mei Hong
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-24       Impact factor: 11.205

3.  Changes in cell wall biomechanical properties in the xyloglucan-deficient xxt1/xxt2 mutant of Arabidopsis.

Authors:  Yong Bum Park; Daniel J Cosgrove
Journal:  Plant Physiol       Date:  2011-11-22       Impact factor: 8.340

4.  In-silico analysis of the structure and binding site features of an α-expansin protein from mountain papaya fruit (VpEXPA2), through molecular modeling, docking, and dynamics simulation studies.

Authors:  Carlos Gaete-Eastman; Luis Morales-Quintana; Raúl Herrera; María Alejandra Moya-León
Journal:  J Mol Model       Date:  2015-04-12       Impact factor: 1.810

Review 5.  Multidimensional solid-state NMR spectroscopy of plant cell walls.

Authors:  Tuo Wang; Pyae Phyo; Mei Hong
Journal:  Solid State Nucl Magn Reson       Date:  2016-08-13       Impact factor: 2.293

Review 6.  Plant expansins: diversity and interactions with plant cell walls.

Authors:  Daniel J Cosgrove
Journal:  Curr Opin Plant Biol       Date:  2015-06-06       Impact factor: 7.834

7.  The Target of β-Expansin EXPB1 in Maize Cell Walls from Binding and Solid-State NMR Studies.

Authors:  Tuo Wang; Yuning Chen; Akira Tabuchi; Daniel J Cosgrove; Mei Hong
Journal:  Plant Physiol       Date:  2016-10-11       Impact factor: 8.340

8.  High-resolution structure of a lytic polysaccharide monooxygenase from Hypocrea jecorina reveals a predicted linker as an integral part of the catalytic domain.

Authors:  Henrik Hansson; Saeid Karkehabadi; Nils Mikkelsen; Nicholai R Douglas; Steve Kim; Anna Lam; Thijs Kaper; Brad Kelemen; Katlyn K Meier; Stephen M Jones; Edward I Solomon; Mats Sandgren
Journal:  J Biol Chem       Date:  2017-09-12       Impact factor: 5.157

9.  Structural basis for entropy-driven cellulose binding by a type-A cellulose-binding module (CBM) and bacterial expansin.

Authors:  Nikolaos Georgelis; Neela H Yennawar; Daniel J Cosgrove
Journal:  Proc Natl Acad Sci U S A       Date:  2012-08-27       Impact factor: 11.205

10.  Analysis of the Binding of Expansin Exl1, from Pectobacterium carotovorum, to Plant Xylem and Comparison to EXLX1 from Bacillus subtilis.

Authors:  Omar E Tovar-Herrera; Mabel Rodríguez; Miguel Olarte-Lozano; Jimmy Andrés Sampedro-Guerrero; Adán Guerrero; Raúl Pinto-Cámara; Xóchitl Alvarado-Affantranger; Christopher D Wood; Jose M Moran-Mirabal; Nina Pastor; Lorenzo Segovia; Claudia Martínez-Anaya
Journal:  ACS Omega       Date:  2018-06-28
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