BACKGROUND: Colorectal cancer (CRC) remains one of the major cancer types and cancer related death worldwide. Sensitive, non-invasive biomarkers that can facilitate disease detection, staging and prediction of therapeutic outcome are highly desirable to improve survival rate and help to determine optimized treatment for CRC. The small non-coding RNAs, microRNAs (miRNAs), have recently been identified as critical regulators for various diseases including cancer and may represent a novel class of cancer biomarkers. The purpose of this study was to identify and validate circulating microRNAs in human plasma for use as such biomarkers in colon cancer. METHODOLOGY/PRINCIPAL FINDINGS: By using quantitative reverse transcription-polymerase chain reaction, we found that circulating miR-141 was significantly associated with stage IV colon cancer in a cohort of 102 plasma samples. Receiver operating characteristic (ROC) analysis was used to evaluate the sensitivity and specificity of candidate plasma microRNA markers. We observed that combination of miR-141 and carcinoembryonic antigen (CEA), a widely used marker for CRC, further improved the accuracy of detection. These findings were validated in an independent cohort of 156 plasma samples collected at Tianjin, China. Furthermore, our analysis showed that high levels of plasma miR-141 predicted poor survival in both cohorts and that miR-141 was an independent prognostic factor for advanced colon cancer. CONCLUSIONS/SIGNIFICANCE: We propose that plasma miR-141 may represent a novel biomarker that complements CEA in detecting colon cancer with distant metastasis and that high levels of miR-141 in plasma were associated with poor prognosis.
BACKGROUND:Colorectal cancer (CRC) remains one of the major cancer types and cancer related death worldwide. Sensitive, non-invasive biomarkers that can facilitate disease detection, staging and prediction of therapeutic outcome are highly desirable to improve survival rate and help to determine optimized treatment for CRC. The small non-coding RNAs, microRNAs (miRNAs), have recently been identified as critical regulators for various diseases including cancer and may represent a novel class of cancer biomarkers. The purpose of this study was to identify and validate circulating microRNAs in human plasma for use as such biomarkers in colon cancer. METHODOLOGY/PRINCIPAL FINDINGS: By using quantitative reverse transcription-polymerase chain reaction, we found that circulating miR-141 was significantly associated with stage IV colon cancer in a cohort of 102 plasma samples. Receiver operating characteristic (ROC) analysis was used to evaluate the sensitivity and specificity of candidate plasma microRNA markers. We observed that combination of miR-141 and carcinoembryonic antigen (CEA), a widely used marker for CRC, further improved the accuracy of detection. These findings were validated in an independent cohort of 156 plasma samples collected at Tianjin, China. Furthermore, our analysis showed that high levels of plasma miR-141 predicted poor survival in both cohorts and that miR-141 was an independent prognostic factor for advanced colon cancer. CONCLUSIONS/SIGNIFICANCE: We propose that plasma miR-141 may represent a novel biomarker that complements CEA in detecting colon cancer with distant metastasis and that high levels of miR-141 in plasma were associated with poor prognosis.
Colorectal cancer (CRC) is a worldwide health problem with 655,000 deaths per year
[1]. In the
United States, CRC is the third most common cancer type and the second most common
cause of cancer-related death [2], with an estimated 51,370 deaths in 2010 according to the
National Cancer Institute. In China, CRC remains the fifth most common cancer type
and the fourth most common cause of cancer-related death [3]. Despite early screening and
development of new chemotherapeutic strategies, CRC survival rates during the past
20 years have not substantially improved. Moreover, the incidence of CRC is
increasing rapidly in recent years in China [4]. Novel biomarkers that are of
clinical value are thus in urgent need to improve compliance rates. Carcinoembryonic
antigen (CEA) has been used as a serum marker of CRC, although its sensitivity has
varied in different studies [5], [6]. Recently, a family of small regulatory RNAs, microRNAs,
has emerged as possible plasma markers for human diseases including cancers due to
their relative stability in the circulation [7].MicroRNAs are small non-coding RNAs (18–22 nt in length) that regulate the
expression of target genes by interfering with transcription or inhibiting
translation [8].
Studies have demonstrated that microRNAs play a crucial role in almost all cellular
biological processes including metabolism, survival, differentiation and apoptosis.
Deregulation of specific microRNAs contributes to a variety of diseases, most
notably the development and progression of cancer, including CRC. Specifically,
microRNA expression profiling in CRC showed that a number of microRNAs, including
miR-21, miR-20a and miR155 were upregulated in tumor tissues and that higher miR-21
was associated with poor therapeutic outcome [9], [10]. The potential of circulating
miRNAs in plasma as cancer biomarkers has also been evaluated in a few studies. For
CRC, a recent study reported that miR-92 levels were significantly higher in plasma
samples from patients than in healthy controls and can be a potential marker for CRC
detection [11]. A
study of plasma samples from prostate cancerpatients reported that plasma miR-141
levels can be used to screen for metastatic prostate cancer with high sensitivity
[12].In this proof-of-principle study to identify potential biomarkers for CRC, we
examined whether selected candidate microRNAs could serve as non-invasive,
blood-based markers for CRC by analyzing the relative levels of three microRNAs
(miR-21, miR-92, and miR-141) in a cohort of 102 plasma samples from healthy
individuals and CRC patients obtained from TexGen, a collaboration of Texas Medical
Center Institutions. Our initial data indicated that among these three microRNAs,
plasma miR-141 levels were significantly elevated in the plasma of colon cancerpatients with Stage IV disease and could readily discriminate distant metastasis
cases from normal controls and patients with other stages. Combination of miR-141
with CEA was complementary and could further increase the detection accuracy of
distant metastasis in colon cancer. These findings were validated in an independent
cohort of 156 plasma samples obtained from Tianjin, China. Our further analyses
provided supporting evidence that plasma miR-141 was a potential prognostic factor
that predicted for poor survival in colon cancerpatients. Interestingly, unlike in
plasma, miR-141 was not differentially expressed in tumor tissues between Stage IV
and Stage I–II colon cancerpatients or between tumor tissues and adjacent
non-tumor tissues in Stage IV patients, suggesting that elevation of plasma miR-141
in Stage IV patients might be derived from other systemic responses such as
inflammatory reactions in these patients.
Materials and Methods
Ethics statement
Both plasma- and tissue-based studies were approved by the Institutional Review
Board (IRB) at the MD Anderson Cancer Center and by the Ethics Committee at the
Tianjin Medical University Cancer Institute and Hospital. All participants gave
written consent of their information to be stored in the hospital database and
used for research.
Clinical samples
Two independent sets of plasma samples were used. A total of 102 plasma samples
from age- and gender- matched healthy individuals and CRC patients (Stage
I–IV) were obtained from TexGen between 2002 and 2008, a collaboration of
Texas Medical Center institutions that provides biological samples as well as
epidemiological and clinical data (TexGen samples, See Table S1).
An independent cohort of 156 plasma samples from age- and gender- matched
healthy donors and colon cancerpatients (Stage I–IV) were obtained at the
Tianjin Medical University Cancer Institute and Hospital, Tianjin, China (TCH
samples) between 2007 and 2009 (See Table S2). Pathologic classification of
disease in all patients was performed following the International Union Against
Cancer (UICC) and American Joint Committee on Cancer (AJCC) TNM staging system
for colon cancer established in 2003. Blood samples were collected from all
patients before operation and therapy. CEA levels of both TexGen and TCH plasma
samples were measured by standard enzyme immunoassay as part of routine clinical
tests and were acquired from the clinical database at each institute. Follow-up
data of all the recruited colon cancerpatients from both TexGen and TCH were
acquired and survival time was calculated from date of diagnosis to the date of
death or last follow-up in June, 2010. All patients recruited to this study had
not received chemotherapy or radiotherapy prior to the blood draws. The
demographic information of the two sets of samples is summarized in the
supplemental material.For the tissue-based analysis tumor tissues from 21 colon cancerpatients with
distant metastatic disease (Stage IV) and 24 colon cancerpatients with
non-metastatic disease (Stage I and II) were collected between 2007 and 2009 by
Tianjin Medical University Cancer Institute and Hospital from the same patients
whose plasma samples were used.
RNA isolation and quantitative RT-PCR
Small RNA was enriched from all plasma samples using the mirVana PARIS RNA
isolation kit (Ambion, Austin, TX). Briefly, 250 µL of plasma was thawed
on ice and centrifuged at 14,000 rpm for 10 minutes to remove cell debris and
other cellular organelles. Next, 150 µL of supernatant was lysed with an
equal volume of 2x denaturing solution. For normalization of sample-to-sample
variation during the RNA isolation procedures, 25 fmol of synthetic C.
elegans miRNA cel-miR-39 was added to each denatured sample. Small
RNAs were then enriched and purified following manufacturer's protocol,
with the exception that the enriched small RNAs were eluted in 45 µL of
preheated nuclease-free water. Standard TRIZOL method (Invitrogen) was used to
isolate total RNA from colon tissues.For microRNA based RT-PCR assays, 2.5 µL of enriched small RNAs from plasma
samples were reverse transcribed using the TaqMan MicroRNA Reverse Transciption
Kit (Applied Biosystems, San Diego, CA) according to manufacturer's
instructions in a total reaction volume of 7.5 µL. A 1∶20 dilution
of RT products was used as template for the PCR stage. PCR reaction was
performed in triplicates using TaqMan 2x Universal PCR Master Mix with
conditions as described previously [13]. No-template controls for
both RT step and PCR step were included to ensure target specific amplification.
The 7900 Sequence Detection System 2.3 (Applied Biosystems) software defaults
were used to compute the relative change in RNA expression by the
2−ΔΔCt method with 95% confidence intervals.
Assays for the TexGen specimens were performed at MD Anderson and assays for the
TCH specimens were performed at Tianjin Medical University Cancer Institute and
Hospital.
MicroRNA profiling
MicroRNA microarray profiling was performed with RNA isolated from the Maryland
cohort using the Ohio State microRNA microarray version 2.0 as previously
described [9]. Microarray data (including raw and processed data)
have been deposited in National Center for Biotechnology Information's
(NCBI's) Gene Expression Omnibus (NCBIGEO GSE7828).
Statistical analysis
The statistical significance was determined by using the Wilcoxon signed-rank
tests between groups. Receiver operating characteristic (ROC) curves were
generated to assess the diagnostic accuracy of each parameter, and the
sensitivity and specificity of the optimum cut-off point were defined as those
values that maximized the area under the ROC curve (AUC). The relative levels of
microRNA were quantified using the 2−ΔΔCt method, and
the data were analyzed as the log10 of the relative quantity of the
target microRNA. The statistical analysis was performed with the use of software
packages SPSS version 16.0 (WPSS Ltd., Surrey, United Kingdom) and graphs were
generated using Graphpad Prism 5.0 (Graphpad Software Inc, California). Spearman
Correlation analysis was performed to reveal correlation between plasma miR-141
expression and CRC stages. All statistical tests were two-sided, and a
P value of 0.05 was considered significant. The correlation
between overall survival and plasma miR-141 was analyzed using Kaplan-Meier
method and Log-rank test. Cox proportional-hazards regression analysis was used
to evaluate whether plasma miR-141 was an independent prognostic factor for
colon cancer.
Results
Plasma miR-141 levels are correlated with clinical stages in colon
cancer
Three microRNAs (miR-21, miR-92 and miR-141) were selected in our studies to
examine their potential to serve as biomarkers for colon cancer. These candidate
miRNAs were selected because 1) miR-21 has been found to be upregulated in CRC
tumor tissues [9], [10], [14]; 2) miR-92 has recently been reported to be a plasma
marker for colon cancer [11]; and 3) miR-141 has been shown to be a potential
plasma marker for metastatic prostate cancer [12]. Quantitative RT-PCR
based microRNA assays on these three miRNAs were performed. We first examined
the correlation between these three miRNAs and colon cancerclinical stages.
Stage I and Stage II cases were grouped together in our analysis because only
limited Stage I cases were available. Heat-map analysis showed that the miR-141
levels clustered according to different stages (Figure 1, A). Spearman correlation analysis
showed that the plasma miR-141 levels were highly correlated with colon cancer
stages (r = 0.605,
P = 1.17×10−8). In contrast,
miR-21 and miR-92 were less correlated with clinical stages (Figure 1, A).
Figure 1
Plasma miR-141, miR-21 and miR-92 levels in healthy controls and
colon cancer patients.
(A) Each row corresponds to a plasma miRNA and each column corresponds to
each sample. Expression levels for each miRNA are normalized across the
samples and shaded in colors such that red denotes high expression and
green denotes low expression. Spearman correlation shows that miR-141 is
highly correlated with stages (r = 0.605,
P = 1.17×10−8).
(B–G) The relative levels of selected plasma microRNAs were
normalized to spike-in control cel-miR-39 and shown as the log10 of the
relative quantity (RQ). The Wilcoxon two-sample tests were performed to
examine the difference of selected plasma microRNAs between normal
controls and colon cancer patients (B–D), or between normal
controls and/or colon cancer patients with different clinical stages
(E–G).
Plasma miR-141, miR-21 and miR-92 levels in healthy controls and
colon cancer patients.
(A) Each row corresponds to a plasma miRNA and each column corresponds to
each sample. Expression levels for each miRNA are normalized across the
samples and shaded in colors such that red denotes high expression and
green denotes low expression. Spearman correlation shows that miR-141 is
highly correlated with stages (r = 0.605,
P = 1.17×10−8).
(B–G) The relative levels of selected plasma microRNAs were
normalized to spike-in control cel-miR-39 and shown as the log10 of the
relative quantity (RQ). The Wilcoxon two-sample tests were performed to
examine the difference of selected plasma microRNAs between normal
controls and colon cancerpatients (B–D), or between normal
controls and/or colon cancerpatients with different clinical stages
(E–G).We next analyzed whether these candidate microRNAs could serve as circulating
colon cancer markers by comparing their plasma levels between cancerpatients
and normal controls. Surprisingly, unlike the previous report that upregulation
of plasma miR-92 was a colon cancer biomarker, the Wilcoxon two-sample test
showed that among these three microRNAs, plasma miR-92 was significantly
decreased in the TexGen cohort of colon cancerpatients
(p = 0.03) (Figure 1, D). However, the decrease in plasma
miR-92 was only observed in Stage I–II and Stage III and the level
increased to a similar level as that of normal controls in Stage IV colon cancer
(Figure 1, G). Plasma
levels of miR-21 and miR-141 did not show significant difference between
controls and cancerpatients (Figure 1, B & C). After stratification of the cancerpatients
according to their clinical stages, plasma miR-141 was significantly upregulated
in Stage IV colon cancer (Figure
1, E). To a much less extent, plasma miR-21 was also shown to be
elevated in Stage IV colon cancer (Figure 1, F). Based on these observations, we sought to focus on
miR-141 for further characterization.
High plasma miR-141 levels are associated with Stage IV colon cancer and
complement with CEA in diagnosis
The above results demonstrated that among the three selected microRNAs, miR-141
was significantly correlated with colon cancer stages. The detailed Wilcoxon
two-sample test showed that the plasma miR-141 was significantly elevated in
Stage IV cases when compared with Stage I–II, Stage III and Stage
I–III combined. The ROC curve was plotted to identify a cut-off value that
could distinguish stage IV colon cancer from other groups. ROC curve analysis
showed that at the optimal cut-off, plasma miR-141 had a 90.9%
sensitivity and a 77.1% specificity in separating Stage IV cases from
Stage I–II cases with an AUC of 0.861 (Figure 2, B), a 77.1% sensitivity and
a 89.7% specificity in separating Stage IV and Stage III cases with an
AUC of 0.803 (Figure 2, C),
and a 77.1% sensitivity and a 89.7% specificity in separating the
Stage IV and combined Stage I–III cases with an AUC of 0.836 (Figure 2, D). Our analysis
also revealed that in this cohort, plasma miR-141 was significantly elevated in
Stage III patients compared with early stage patients
(p = 0.025) (Figure 2, A). These results suggest that
circulating miR-141 might be a novel biomarker for metastatic colon cancer.
Figure 2
Higher plasma miR-141 is significantly associated with Stage IV colon
cancer in the training set.
(A) Small RNA was isolated from plasma samples and miR-141 was measured
by quantitative RT-PCR assays. The Wilcoxon two-sample test was
performed to evaluate differences of miR-141 levels between the Stage
III and Stage I–II groups. ROC analysis was performed to determine
the sensitivity and specificity with the value of AUC in the right
panel. The Wilcoxon two-sample tests between (B) Stage IV and Stage
I–II, (C) Stage IV and Sage III, and (D) Stage IV and Stage
I–III groups were performed to evaluate the association of plasma
miR-141 with Stage IV disease status.
Higher plasma miR-141 is significantly associated with Stage IV colon
cancer in the training set.
(A) Small RNA was isolated from plasma samples and miR-141 was measured
by quantitative RT-PCR assays. The Wilcoxon two-sample test was
performed to evaluate differences of miR-141 levels between the Stage
III and Stage I–II groups. ROC analysis was performed to determine
the sensitivity and specificity with the value of AUC in the right
panel. The Wilcoxon two-sample tests between (B) Stage IV and Stage
I–II, (C) Stage IV and Sage III, and (D) Stage IV and Stage
I–III groups were performed to evaluate the association of plasma
miR-141 with Stage IV disease status.Because the blood CEA test is widely used marker for CRC patients, we sought to
compare the performance of miR-141 with CEA as a biomarker. We examined whether
a combination of miR-141 and CEA was more sensitive than either marker when used
individually. Our analysis showed that they were indeed complementary. When the
specificity was set at 100%, miR-141 identified seven Stage IV colon
cancer that were missed by CEA alone and CEA identified four Stage IV metastatic
colon cancer cases that were missed by miR-141 alone (Figure 3).
Figure 3
Combination of CEA and miR-141 identifies additional Stage IV cases
in the training cohort.
Two-parameter (expression of miR-141 and CEA in plasma) classification is
used to discriminate distant metastatic colon cancer. The cut-off value
for CEA is 5.0 ng/mL, and for miR-141 is 16.77 defined from the ROC
curve. The corresponding cut-off values are marked by grey lines.
Combination of CEA and miR-141 identifies additional Stage IV cases
in the training cohort.
Two-parameter (expression of miR-141 and CEA in plasma) classification is
used to discriminate distant metastatic colon cancer. The cut-off value
for CEA is 5.0 ng/mL, and for miR-141 is 16.77 defined from the ROC
curve. The corresponding cut-off values are marked by grey lines.
Validation of plasma miR-141 as a colon cancer marker in an independent
population
Results from the above studies provided evidence that high levels of circulating
miR-141 could be a potential biomarker that complements CEA for metastatic colon
cancer. To further validate the potential utility of miR-141 in the clinical
management of colon cancer, we performed a validation study with an independent
set of plasma samples (TCH samples) (See Table S2 for demographic information of TCH
cases). The measurements were made independently following the same experimental
procedures used for the TexGen samples.The results validated that the plasma miR-141 level was significantly higher in
Stage IV patients than in normal controls, Stage I–II and Stage III
patients (Figure 4, A).
Specifically, the ROC curves showed that a cut-off for plasma miR-141 could be
determined with a 66.7% sensitivity and a 80.8% specificity for
separating the Stage IV cases from the Stage I–II cases
(AUC = 0.756) (Figure 4, B), a 66.7% sensitivity and a 89.7%
specificity for separating from Stage III cases
(AUC = 0.779) (Figure 4, C), and a 66.7% sensitivity and a 84.0%
specificity for separating from Stage 1–III cases
(AUC = 0.764) (Figure 4, D). Unlike in TexGen plasma samples, we however failed to
detect a significant difference in miR-141 levels between Stage III and Stage
I–II cases (not shown), suggesting that higher plasma miR-141 is more
associated with distant and less with lymph-node metastasis in colon cancer.
Figure 4
Higher plasma miR-141 level is associated with Stage IV colon cancer
patients in the validation data set.
Small RNA isolation and miR-141 quantitative RT-PCR assays were performed
in the same way as for the training cohort. (A) The Wilcoxon two-sample
test was performed to compare miR-141 levels between normal controls
and/or colon cancer patients with different clinical stages. (B–D)
The same analyses were performed to compare miR-141 levels between Stage
IV cases and Stage I–II cases (B), between Stage IV and Stage III
cases (C), and between Stage IV and Stage I–III cases (D),
respectively. ROC analysis was performed to determine the sensitivity
and specificity with the value of AUC in the right panel. (E)
Combination of CEA and miR-141 identified additional metastatic patients
that were missed by either marker alone. See Figure 3 for the definition of the
cut-off values for CEA and miR-141.
Higher plasma miR-141 level is associated with Stage IV colon cancer
patients in the validation data set.
Small RNA isolation and miR-141 quantitative RT-PCR assays were performed
in the same way as for the training cohort. (A) The Wilcoxon two-sample
test was performed to compare miR-141 levels between normal controls
and/or colon cancerpatients with different clinical stages. (B–D)
The same analyses were performed to compare miR-141 levels between Stage
IV cases and Stage I–II cases (B), between Stage IV and Stage III
cases (C), and between Stage IV and Stage I–III cases (D),
respectively. ROC analysis was performed to determine the sensitivity
and specificity with the value of AUC in the right panel. (E)
Combination of CEA and miR-141 identified additional metastatic patients
that were missed by either marker alone. See Figure 3 for the definition of the
cut-off values for CEA and miR-141.We also evaluated the CEA data in the TCH dataset. Similar to what was shown in
the TexGen samples, combination of miR-141 and CEA identified additional
metastatic cases that were otherwise missed by either marker used alone (Figure 4, E). This finding
validated that the combination of these two biomarkers was a more effective
approach for detecting Stage IV CRC patients.
Plasma miR-141 is correlated with poor survival in colon cancer
To further evaluate whether plasma miR-141 levels can predict prognosis, we next
performed a survival analysis on TexGen and TCH cases. Kaplan-Meier survival
curves showed that higher expression of plasma miR-141 was significantly
correlated with poor survival both in TexGen
(P = 0.004, log-rank test) and Tianjin
(P = 0.002, log-rank test) cohorts
(Figure
S1, A and B). Univariate Cox regression analysis demonstrated that
plasma miR-141 was a significant prognostic indicator of the colon cancer in
TexGen (HR = 3.80,
95%CI = 1.46−91) and Tianjin cases
(HR = 4.83,
95%CI = 2.06−11.35), respectively (Table 1). To avoid any
potential bias between the TexGen cohort and Tianjin cohort, we performed the
univariate and multivariate survival analyses for all cases. The multivariate
Cox proportional hazard regression analysis showed that plasma miR-141was an
independent prognostic marker in colon cancerpatients when we merged the
samples from both centers (HR = 2.40,
95%CI = 1.18−4.86) (Table 1).
Table 1
Plasma miR-141 is an independent prognostic factor by Cox regression
analysis.
Univariate analysis
Multivariate analysis
Hazard ratio (95% CI)
P1
Hazard ratio (95% CI)
P2
TexGen
miR-141
3.80(1.46, 9.91)
0.006
1.36(0.45, 4.14)
0.589
Sex
0.43(0.20, 0.97)
0.042
0.45(0.19, 1.05)
0.063
Age
1.40(0.97, 1.12)
0.280
1.03(0.97, 1.10)
0.364
Stage
3.56(1.79, 7.09)
3.07×10−4
3.37(1.50, 7.55)
0.003
Tianjin
miR-141
4.83(2.06, 11.35)
2.98×10−4
3.41(1.36, 8.56)
0.009
Sex
1.47(0.63, 3.41)
0.370
1.02(0.43, 2.44)
0.964
Age
0.99(0.96, 1.03)
0.710
0.99(0.97, 1.03)
0.578
Stage
3.82(2.11, 6.93)
1.05×10−5
3.22(1.75, 5.92)
1.67×10−4
All Cases
miR-141
3.61(1.96, 6.65)
3.80×10−5
2.40(1.18, 4.86)
0.016*
Sex
0.75(0.42, 1.35)
0.337
0.65(0.36, 1.19)
0.162*
Age
1.00(0.97, 1.04)
0.828
1.00(0.97, 1.03)
0.912*
Stage
3.30(2.14, 5.09)
6.55×10−8
3.16(1.97, 5.07)
1.90×10−6*
*Adjusted by the different centers.
*Adjusted by the different centers.
MiR-141 is not differentially expressed in colon cancer tissues
We sought to determine whether the elevated miR-141 in plasma from Stage IV CRC
patients reflected differential expression in the tumor tissues from different
disease stages. We first compared miR-141 levels in tumor tissues between Stage
I–II and Stage IV in the TCH cohort, which surprisingly showed that
miR-141 was not upregulated in Stage IV cases
(p = 0.495) (Figure 5, A). We next analyzed our previously
described microRNA microarray profiling data (GEO, GSE7828). Our analysis also
confirmed that the miR-141 level was not significantly higher in tumor tissues
than in adjacent normal tissues in stage IV patients, as well as in patients of
other stages (Figure 5,
B).
Figure 5
MiR-141 in tumor tissues is not associated with colon cancer tumor
stage.
(A) Total RNA was isolated from tumor tissues of metastatic or
non-metastatic patients from the Tianjin cohort, and the miR-141 levels
were measured with quantitative RT-PCR using RNU6B as an endogenous
control. The Wilcoxon two-sample test was performed to compare miR-141
expression in tumor tissues between these two groups. A
P<0.05 is considered significant. (B) The
miR-141 expression levels were measured using microRNA profiling data
from the Maryland cohort of CRC samples. The Wilcoxon matched-pairs
tests were performed to compare the miR-141 levels between tumor tissues
and adjacent normal tissues in these CRC patients.
MiR-141 in tumor tissues is not associated with colon cancer tumor
stage.
(A) Total RNA was isolated from tumor tissues of metastatic or
non-metastatic patients from the Tianjin cohort, and the miR-141 levels
were measured with quantitative RT-PCR using RNU6B as an endogenous
control. The Wilcoxon two-sample test was performed to compare miR-141
expression in tumor tissues between these two groups. A
P<0.05 is considered significant. (B) The
miR-141 expression levels were measured using microRNA profiling data
from the Maryland cohort of CRC samples. The Wilcoxon matched-pairs
tests were performed to compare the miR-141 levels between tumor tissues
and adjacent normal tissues in these CRC patients.
Discussion
In this study, we took a focused approach and examined three candidate microRNAs for
their potential value as plasma biomarkers for colon cancer. Results from the Texas
study revealed that plasma miR-141 was a sensitive marker and complemented CEA for
detecting Stage IV colon cancer. This result was independently validated using a
cohort of samples from colon cancerpatients in Tianjin, China. Thus, this
collaborative investigation carried out by two independent teams of researchers at
two different sites on different ethnic patient populations provides strong evidence
that miR-141 is a valid plasma marker that complements CEA in determining stage IV
colon cancer. Importantly, our data also demonstrated that higher plasma miR-141 was
associated with shorter survival in both cohorts and that miR-141 was an independent
prognostic indicator for colon cancer. We believe that the identification of miR-141
may represent a key advancement in the search for valuable plasma markers for colon
cancer that have the potential to be translated into clinical applications including
prognosis, monitoring response to therapy, and detecting disease recurrence. Further
validation in a larger cohort of samples and a prospective study will be needed to
determine conclusively whether miR-141 serves as a circulating marker for late stage
colon cancer.Apart from the potential impact on clinical diagnosis and prognosis, this study also
revealed some intriguing aspects regarding the origin of serum miRNAs in cancer.
Results from this study and the previous study reporting miR-141 elevation in
metastatic prostate cancer [12] link miR-141 to metastasis, we thus tested a
straightforward hypothesis that the elevated plasma miR-141 reflected the elevated
miR-141 level in tissue in Stage IV colon cancerpatients. However surprisingly, we
did not observe a significant difference in the miR-141 expression levels between
tumor tissues and adjacent normal tissues among different stages of CRC or in tumor
tissues between non-metastatic Stage I–II and metastatic Stage IV. Therefore,
the elevation of miR-141 in plasma is not a simple indication of elevated miR-141 in
corresponding tumor tissues at the primary site. It is possible that miR-141 is only
elevated in the metastases at the secondary site. MiR-141 belongs to the miR-200
family, which promotes the mesenchymal-to-epithelial transition (MET) by inhibiting
the expression of the E-cadherin transcriptional suppressors ZEB1 and ZEB2 [15], [16]. Thus it is
consistent that we did not observe elevated miR-141 at the primary site of Stage IV
colon cancer where EMT instead of MET is believed to occur resulting in cells with
higher potential for cell migration and metastasis. When mesenchymal-like metastatic
cells extravosate at distant site, a transition to epithelial (MET) occurs, which
may explain the surge of miR-141 in metastatic cancer. This hypothesis will need to
be tested with matching primary tumors and metastases in the future.Another possibility is that selected cellular miRNAs contribute more significantly to
the circulating miRNAs in cancerpatients. The in vitro studies
also showed that miRNA expression profiles in conditioned medium were different from
those in cells, and those secreted miRNAs may represent a class of signaling
molecules in mediating intercellular communication [17], although the mechanisms control
microRNA packaging and secretion are largely unknown. In cancerpatients especially
at late stage, there are many systemic changes including inflammatory response that
can involve immune systems and other organs. It is conceivable that these systemic
responses may be a source of change in circulating miRNAs in cancerpatients. Along
this line, in addition to colon and prostate cancers, circulating miR-141 level has
also been associated with other pathophysiological conditions including ovarian
cancer [18] and
pregnancy [19]. The
difference in miR-141 in plasma between Stage IV and Stage I–II CRC may be
related to differential inflammatory response in CRC and this possibility will need
to be further investigated in the future.Among our candidate miRNAs, miR-21 is an oncogene that is altered in many tumors by
regulating the expression of multiple cancer-related target genes such as PTEN and
TPM1 [20], [21]. Previous studies
showed that expression of miR-21 was upregulated in CRC tumor tissues and was
gradually elevated during tumor progression from early stage to late stage as
compared with matched non-tumor tissues, suggesting that it would be a good
circulating marker for CRC detection if this same elevation trend were seen in
plasma. However, our analysis did not reveal a difference of plasma miR-21 between
cancerpatients and healthy controls. Although circulating miR-21 was also
significantly elevated in patients with distant metastasis, the sensitivity and
specificity were much lower than those for miR-141. Similarly, miR-92, a previously
identified plasma markers for CRC in the Hong Kong cohorts did not represent a
useful marker in our initial analysis of the TexGen cohort. We reason that the
genetic variations among different ethic groups as well as environmental factors and
diets may contribute to these conflicting conclusions.Although the origin of the plasma miR-141 is yet to be resolved, our work suggested
that the ongoing search for plasma miRNA markers can be a fruitful process. In
comparison to other nucleotide molecules such as DNA and mRNA, miRNAs are resistant
to DNase or RNase activity and, thus, are relatively stable in the
circulation. In addition to our report here, there are increasing examples of
plasma miRNAs as potential biomarkers. In acute leukemiapatients, the plasma miR-92
level is dramatically reduced (similar to what we observed with our CRC in this
study), and the ratio of miR-92a/miR-638 in plasma is a potential biomarker for this
disease [22]. In
addition, plasma levels of a panel of four miRNAs (miR-21, miR-210, miR-155, and
miR-196a) were found to be potential markers for pancreatic cancer [23], and miR-31
upregulation in plasma may be a biomarker for oral cancer [24]. These studies showed the
potential of using circulating miRNAs as biomarkers, but they are of limited value
at present because of a lack of independent validations. In our study, the fact that
plasma miR-141 was shown to be a prognostic factor in two independent cohorts
consisting of two different ethnic populations provides compelling evidence that
miR-141 may emerges as a valuable marker of clinical significance.Although biomarkers for advanced cancer can be potentially used to monitor and
predict therapeutic outcome, biomarkers that can detect early stage disease and
monitor early metastasis are expected to represent more clinically relevant
endpoints in the increase of overall survival rate. Future efforts are still needed
to identify circulating microRNAs as biomarkers that can accurately detect CRC at
its early stage.Higher miR-141 predicts poor prognosis in both cohorts.
Kaplan-Meier survival curves for colon cancerpatients in both cohorts. The
survival data were compared using the log-rank test and miR-141 expression
levels in patients defined as high or low relative to the median. P-value of
log-rank test is 0.004 and 0.002 in TexGen (A) and Tianjin (B) cohorts,
respectively. Higher plasma levels of miR-141 were associated with poor
overall survival in colon cancerpatients.(JPG)Click here for additional data file.(DOC)Click here for additional data file.(DOC)Click here for additional data file.
Authors: Nathan D Price; Jonathan Trent; Adel K El-Naggar; David Cogdell; Ellen Taylor; Kelly K Hunt; Raphael E Pollock; Leroy Hood; Ilya Shmulevich; Wei Zhang Journal: Proc Natl Acad Sci U S A Date: 2007-02-21 Impact factor: 11.205
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Authors: Avi Schroeder; Daniel A Heller; Monte M Winslow; James E Dahlman; George W Pratt; Robert Langer; Tyler Jacks; Daniel G Anderson Journal: Nat Rev Cancer Date: 2011-12-23 Impact factor: 60.716