Literature DB >> 21444804

Universal noninvasive detection of solid organ transplant rejection.

Thomas M Snyder1, Kiran K Khush, Hannah A Valantine, Stephen R Quake.   

Abstract

It is challenging to monitor the health of transplanted organs, particularly with respect to rejection by the host immune system. Because transplanted organs have genomes that are distinct from the recipient's genome, we used high throughput shotgun sequencing to develop a universal noninvasive approach to monitoring organ health. We analyzed cell-free DNA circulating in the blood of heart transplant recipients and observed significantly increased levels of cell-free DNA from the donor genome at times when an endomyocardial biopsy independently established the presence of acute cellular rejection in these heart transplant recipients. Our results demonstrate that cell-free DNA can be used to detect an organ-specific signature that correlates with rejection, and this measurement can be made on any combination of donor and recipient. This noninvasive test holds promise for replacing the endomyocardial biopsy in heart transplant recipients and may be applicable to other solid organ transplants.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 21444804      PMCID: PMC3076856          DOI: 10.1073/pnas.1013924108

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  27 in total

1.  Origin of plasma cell-free DNA after solid organ transplantation.

Authors:  Yanni Y N Lui; Kam-Sang Woo; Angela Y M Wang; Chung-Kwong Yeung; Philip K T Li; Elaine Chau; Peter Ruygrok; Y M Dennis Lo
Journal:  Clin Chem       Date:  2003-03       Impact factor: 8.327

2.  Apoptosis and expression of heme oxygenase-1 in heart transplant recipients during acute rejection episode.

Authors:  R Chok; M Sénéchal; R Dorent; Z Mallat; P Leprince; A Pavie; J J Ghossoub; I Gandjbakhch
Journal:  Transplant Proc       Date:  2002-11       Impact factor: 1.066

Review 3.  Molecular testing in the management of cardiac transplant recipients: initial clinical experience.

Authors:  Randall C Starling; Michael Pham; Hannah Valantine; Leslie Miller; Howard Eisen; E Rene Rodriguez; David O Taylor; Mohamad H Yamani; Jon Kobashigawa; Kenneth McCurry; Charles Marboe; Mandeep R Mehra; Andreas Zuckerman; Mario C Deng
Journal:  J Heart Lung Transplant       Date:  2006-12       Impact factor: 10.247

4.  Whole blood genomic biomarkers of acute cardiac allograft rejection.

Authors:  David Lin; Zsuzsanna Hollander; Raymond T Ng; Carol Imai; Andrew Ignaszewski; Robert Balshaw; Gabriela Cohen Freue; Janet E Wilson-McManus; Pooran Qasimi; Anna Meredith; Alice Mui; Tim Triche; Robert McMaster; Paul A Keown; Bruce M McManus
Journal:  J Heart Lung Transplant       Date:  2009-09       Impact factor: 10.247

Review 5.  Cell-free DNA in urine: a marker for kidney graft rejection, but not for prenatal diagnosis?

Authors:  X Y Zhong; D Hahn; C Troeger; A Klemm; G Stein; P Thomson; W Holzgreve; S Hahn
Journal:  Ann N Y Acad Sci       Date:  2001-09       Impact factor: 5.691

6.  Gene-expression profiling for rejection surveillance after cardiac transplantation.

Authors:  Michael X Pham; Jeffrey J Teuteberg; Abdallah G Kfoury; Randall C Starling; Mario C Deng; Thomas P Cappola; Andrew Kao; Allen S Anderson; William G Cotts; Gregory A Ewald; David A Baran; Roberta C Bogaev; Barbara Elashoff; Helen Baron; James Yee; Hannah A Valantine
Journal:  N Engl J Med       Date:  2010-04-22       Impact factor: 91.245

7.  Microfluidic digital PCR enables rapid prenatal diagnosis of fetal aneuploidy.

Authors:  H Christina Fan; Yair J Blumenfeld; Yasser Y El-Sayed; Jane Chueh; Stephen R Quake
Journal:  Am J Obstet Gynecol       Date:  2009-05       Impact factor: 8.661

8.  A second generation human haplotype map of over 3.1 million SNPs.

Authors:  Kelly A Frazer; Dennis G Ballinger; David R Cox; David A Hinds; Laura L Stuve; Richard A Gibbs; John W Belmont; Andrew Boudreau; Paul Hardenbol; Suzanne M Leal; Shiran Pasternak; David A Wheeler; Thomas D Willis; Fuli Yu; Huanming Yang; Changqing Zeng; Yang Gao; Haoran Hu; Weitao Hu; Chaohua Li; Wei Lin; Siqi Liu; Hao Pan; Xiaoli Tang; Jian Wang; Wei Wang; Jun Yu; Bo Zhang; Qingrun Zhang; Hongbin Zhao; Hui Zhao; Jun Zhou; Stacey B Gabriel; Rachel Barry; Brendan Blumenstiel; Amy Camargo; Matthew Defelice; Maura Faggart; Mary Goyette; Supriya Gupta; Jamie Moore; Huy Nguyen; Robert C Onofrio; Melissa Parkin; Jessica Roy; Erich Stahl; Ellen Winchester; Liuda Ziaugra; David Altshuler; Yan Shen; Zhijian Yao; Wei Huang; Xun Chu; Yungang He; Li Jin; Yangfan Liu; Yayun Shen; Weiwei Sun; Haifeng Wang; Yi Wang; Ying Wang; Xiaoyan Xiong; Liang Xu; Mary M Y Waye; Stephen K W Tsui; Hong Xue; J Tze-Fei Wong; Luana M Galver; Jian-Bing Fan; Kevin Gunderson; Sarah S Murray; Arnold R Oliphant; Mark S Chee; Alexandre Montpetit; Fanny Chagnon; Vincent Ferretti; Martin Leboeuf; Jean-François Olivier; Michael S Phillips; Stéphanie Roumy; Clémentine Sallée; Andrei Verner; Thomas J Hudson; Pui-Yan Kwok; Dongmei Cai; Daniel C Koboldt; Raymond D Miller; Ludmila Pawlikowska; Patricia Taillon-Miller; Ming Xiao; Lap-Chee Tsui; William Mak; You Qiang Song; Paul K H Tam; Yusuke Nakamura; Takahisa Kawaguchi; Takuya Kitamoto; Takashi Morizono; Atsushi Nagashima; Yozo Ohnishi; Akihiro Sekine; Toshihiro Tanaka; Tatsuhiko Tsunoda; Panos Deloukas; Christine P Bird; Marcos Delgado; Emmanouil T Dermitzakis; Rhian Gwilliam; Sarah Hunt; Jonathan Morrison; Don Powell; Barbara E Stranger; Pamela Whittaker; David R Bentley; Mark J Daly; Paul I W de Bakker; Jeff Barrett; Yves R Chretien; Julian Maller; Steve McCarroll; Nick Patterson; Itsik Pe'er; Alkes Price; Shaun Purcell; Daniel J Richter; Pardis Sabeti; Richa Saxena; Stephen F Schaffner; Pak C Sham; Patrick Varilly; David Altshuler; Lincoln D Stein; Lalitha Krishnan; Albert Vernon Smith; Marcela K Tello-Ruiz; Gudmundur A Thorisson; Aravinda Chakravarti; Peter E Chen; David J Cutler; Carl S Kashuk; Shin Lin; Gonçalo R Abecasis; Weihua Guan; Yun Li; Heather M Munro; Zhaohui Steve Qin; Daryl J Thomas; Gilean McVean; Adam Auton; Leonardo Bottolo; Niall Cardin; Susana Eyheramendy; Colin Freeman; Jonathan Marchini; Simon Myers; Chris Spencer; Matthew Stephens; Peter Donnelly; Lon R Cardon; Geraldine Clarke; David M Evans; Andrew P Morris; Bruce S Weir; Tatsuhiko Tsunoda; James C Mullikin; Stephen T Sherry; Michael Feolo; Andrew Skol; Houcan Zhang; Changqing Zeng; Hui Zhao; Ichiro Matsuda; Yoshimitsu Fukushima; Darryl R Macer; Eiko Suda; Charles N Rotimi; Clement A Adebamowo; Ike Ajayi; Toyin Aniagwu; Patricia A Marshall; Chibuzor Nkwodimmah; Charmaine D M Royal; Mark F Leppert; Missy Dixon; Andy Peiffer; Renzong Qiu; Alastair Kent; Kazuto Kato; Norio Niikawa; Isaac F Adewole; Bartha M Knoppers; Morris W Foster; Ellen Wright Clayton; Jessica Watkin; Richard A Gibbs; John W Belmont; Donna Muzny; Lynne Nazareth; Erica Sodergren; George M Weinstock; David A Wheeler; Imtaz Yakub; Stacey B Gabriel; Robert C Onofrio; Daniel J Richter; Liuda Ziaugra; Bruce W Birren; Mark J Daly; David Altshuler; Richard K Wilson; Lucinda L Fulton; Jane Rogers; John Burton; Nigel P Carter; Christopher M Clee; Mark Griffiths; Matthew C Jones; Kirsten McLay; Robert W Plumb; Mark T Ross; Sarah K Sims; David L Willey; Zhu Chen; Hua Han; Le Kang; Martin Godbout; John C Wallenburg; Paul L'Archevêque; Guy Bellemare; Koji Saeki; Hongguang Wang; Daochang An; Hongbo Fu; Qing Li; Zhen Wang; Renwu Wang; Arthur L Holden; Lisa D Brooks; Jean E McEwen; Mark S Guyer; Vivian Ota Wang; Jane L Peterson; Michael Shi; Jack Spiegel; Lawrence M Sung; Lynn F Zacharia; Francis S Collins; Karen Kennedy; Ruth Jamieson; John Stewart
Journal:  Nature       Date:  2007-10-18       Impact factor: 49.962

9.  Noninvasive diagnosis of fetal aneuploidy by shotgun sequencing DNA from maternal blood.

Authors:  H Christina Fan; Yair J Blumenfeld; Usha Chitkara; Louanne Hudgins; Stephen R Quake
Journal:  Proc Natl Acad Sci U S A       Date:  2008-10-06       Impact factor: 11.205

10.  Cell-free DNA as a noninvasive acute rejection marker in renal transplantation.

Authors:  Vanessa García Moreira; Belen Prieto García; Jose M Baltar Martín; Francisco Ortega Suárez; Francisco V Alvarez
Journal:  Clin Chem       Date:  2009-09-03       Impact factor: 8.327

View more
  113 in total

Review 1.  Liquid biopsies: donor-derived cell-free DNA for the detection of kidney allograft injury.

Authors:  Michael Oellerich; Karen Sherwood; Paul Keown; Ekkehard Schütz; Julia Beck; Johannes Stegbauer; Lars Christian Rump; Philip D Walson
Journal:  Nat Rev Nephrol       Date:  2021-05-24       Impact factor: 28.314

Review 2.  Personalized treatment in heart transplantation.

Authors:  Kiran K Khush
Journal:  Curr Opin Organ Transplant       Date:  2017-06       Impact factor: 2.640

3.  Rapid detection of donor cell free DNA in lung transplant recipients with rejections using donor-recipient HLA mismatch.

Authors:  Jun Zou; Brian Duffy; Michael Slade; Andrew Lee Young; Nancy Steward; Ramsey Hachem; T Mohanakumar
Journal:  Hum Immunol       Date:  2017-03-04       Impact factor: 2.850

Review 4.  Moving Biomarkers toward Clinical Implementation in Kidney Transplantation.

Authors:  Madhav C Menon; Barbara Murphy; Peter S Heeger
Journal:  J Am Soc Nephrol       Date:  2017-01-06       Impact factor: 10.121

Review 5.  Transplant genetics and genomics.

Authors:  Joshua Y C Yang; Minnie M Sarwal
Journal:  Nat Rev Genet       Date:  2017-03-13       Impact factor: 53.242

6.  Cell-Free DNA and Active Rejection in Kidney Allografts.

Authors:  Roy D Bloom; Jonathan S Bromberg; Emilio D Poggio; Suphamai Bunnapradist; Anthony J Langone; Puneet Sood; Arthur J Matas; Shikha Mehta; Roslyn B Mannon; Asif Sharfuddin; Bernard Fischbach; Mohanram Narayanan; Stanley C Jordan; David Cohen; Matthew R Weir; David Hiller; Preethi Prasad; Robert N Woodward; Marica Grskovic; John J Sninsky; James P Yee; Daniel C Brennan
Journal:  J Am Soc Nephrol       Date:  2017-03-09       Impact factor: 10.121

7.  Tissue-specific exosome biomarkers for noninvasively monitoring immunologic rejection of transplanted tissue.

Authors:  Prashanth Vallabhajosyula; Laxminarayana Korutla; Andreas Habertheuer; Ming Yu; Susan Rostami; Chao-Xing Yuan; Sanjana Reddy; Chengyang Liu; Varun Korutla; Brigitte Koeberlein; Jennifer Trofe-Clark; Michael R Rickels; Ali Naji
Journal:  J Clin Invest       Date:  2017-03-20       Impact factor: 14.808

8.  Endomyocardial biopsy for monitoring heart transplant patients: 11-years-experience at a german heart center.

Authors:  Thomas Strecker; Johannes Rösch; Michael Weyand; Abbas Agaimy
Journal:  Int J Clin Exp Pathol       Date:  2012-11-20

9.  Chip in a lab: Microfluidics for next generation life science research.

Authors:  Aaron M Streets; Yanyi Huang
Journal:  Biomicrofluidics       Date:  2013-01-31       Impact factor: 2.800

10.  Identification of tissue-specific cell death using methylation patterns of circulating DNA.

Authors:  Roni Lehmann-Werman; Daniel Neiman; Hai Zemmour; Joshua Moss; Judith Magenheim; Adi Vaknin-Dembinsky; Sten Rubertsson; Bengt Nellgård; Kaj Blennow; Henrik Zetterberg; Kirsty Spalding; Michael J Haller; Clive H Wasserfall; Desmond A Schatz; Carla J Greenbaum; Craig Dorrell; Markus Grompe; Aviad Zick; Ayala Hubert; Myriam Maoz; Volker Fendrich; Detlef K Bartsch; Talia Golan; Shmuel A Ben Sasson; Gideon Zamir; Aharon Razin; Howard Cedar; A M James Shapiro; Benjamin Glaser; Ruth Shemer; Yuval Dor
Journal:  Proc Natl Acad Sci U S A       Date:  2016-03-14       Impact factor: 11.205

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.