Literature DB >> 21430693

Dihydrogen contacts in alkanes are subtle but not faint.

Jorge Echeverría1, Gabriel Aullón, David Danovich, Sason Shaik, Santiago Alvarez.   

Abstract

Alkane molecules are held together in the crystal state by purportedly weak homonuclear R-H···H-R dihydrogen interactions. In an apparent contradiction, the high melting points and vaporization enthalpies of polyhedranes in condensed phases require quite strong intermolecular interactions. Two questions arise: 'How strong can a weak C-H···H-C bond be?' and 'How do the size and topology of the carbon skeleton affect these bonding interactions?' A systematic computational study of intermolecular interactions in dimers of n-alkanes and polyhedranes, such as tetrahedrane, cubane, octahedrane or dodecahedrane, showed that attractive C-H···H-C interactions are stronger than usually thought. We identified factors that account for the strength of these interactions, including the tertiary nature of the carbon atoms and their low pyramidality. An alkane with a bowl shape was designed in the search for stronger dihydrogen intermolecular bonding, and a dissociation energy as high as 12 kJ mol⁻¹ is predicted by our calculations.

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Year:  2011        PMID: 21430693     DOI: 10.1038/nchem.1004

Source DB:  PubMed          Journal:  Nat Chem        ISSN: 1755-4330            Impact factor:   24.427


  14 in total

Review 1.  Dihydrogen bonding: structures, energetics, and dynamics.

Authors:  R Custelcean; J E Jackson
Journal:  Chem Rev       Date:  2001-07       Impact factor: 60.622

2.  Hexakis(trimethylsilyl)tetrahedranyltetrahedrane.

Authors:  Masanobu Tanaka; Akira Sekiguchi
Journal:  Angew Chem Int Ed Engl       Date:  2005-09-12       Impact factor: 15.336

3.  How molecules stick together in organic crystals: weak intermolecular interactions.

Authors:  Jack D Dunitz; Angelo Gavezzotti
Journal:  Chem Soc Rev       Date:  2009-07-13       Impact factor: 54.564

4.  Comparative study of weak interactions in molecular crystals: H-H bonds vs hydrogen bonds.

Authors:  David J Wolstenholme; T Stanley Cameron
Journal:  J Phys Chem A       Date:  2006-07-20       Impact factor: 2.781

5.  Tetrakis(trimethylsilyl)tetrahedrane.

Authors:  Günther Maier; Jörg Neudert; Oliver Wolf; Dirk Pappusch; Akira Sekiguchi; Masanobu Tanaka; Tsukasa Matsuo
Journal:  J Am Chem Soc       Date:  2002-11-20       Impact factor: 15.419

6.  Coordination chemistry of buckybowls: from corannulene to a hemifullerene.

Authors:  Marina A Petrukhina; Lawrence T Scott
Journal:  Dalton Trans       Date:  2005-07-08       Impact factor: 4.390

7.  Molecules and crystals with both icosahedral and cubic symmetry.

Authors:  Jorge Echeverría; David Casanova; Miquel Llunell; Pere Alemany; Santiago Alvarez
Journal:  Chem Commun (Camb)       Date:  2008-05-01       Impact factor: 6.222

8.  Hydrogen-hydrogen bonding: a stabilizing interaction in molecules and crystals.

Authors:  Chérif F Matta; Jesús Hernández-Trujillo; Ting-Hua Tang; Richard F W Bader
Journal:  Chemistry       Date:  2003-05-09       Impact factor: 5.236

9.  Halogen bonding in supramolecular chemistry.

Authors:  Pierangelo Metrangolo; Franck Meyer; Tullio Pilati; Giuseppe Resnati; Giancarlo Terraneo
Journal:  Angew Chem Int Ed Engl       Date:  2008       Impact factor: 15.336

10.  Bond paths are not chemical bonds.

Authors:  Richard F W Bader
Journal:  J Phys Chem A       Date:  2009-09-24       Impact factor: 2.781

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  20 in total

1.  Hydrogen bond design principles.

Authors:  Lucas J Karas; Chia-Hua Wu; Ranjita Das; Judy I-Chia Wu
Journal:  Wiley Interdiscip Rev Comput Mol Sci       Date:  2020-05-16

2.  Reply to 'entropic factors also contribute to the high melting points of polyhedral alkanes'.

Authors:  Sason Shaik; Santiago Alvarez
Journal:  Nat Chem       Date:  2015-02       Impact factor: 24.427

3.  Entropic factors also contribute to the high melting points of polyhedral alkanes.

Authors:  Andrew D Bond
Journal:  Nat Chem       Date:  2015-02       Impact factor: 24.427

4.  Roles of electrostatic interaction and dispersion in CH···CH, CH···π, and π···π ethylene dimers.

Authors:  Ye Cao; Ming Wah Wong
Journal:  J Mol Model       Date:  2014-03-28       Impact factor: 1.810

5.  Ligand-Substrate Dispersion Facilitates the Copper-Catalyzed Hydroamination of Unactivated Olefins.

Authors:  Gang Lu; Richard Y Liu; Yang Yang; Cheng Fang; Daniel S Lambrecht; Stephen L Buchwald; Peng Liu
Journal:  J Am Chem Soc       Date:  2017-11-09       Impact factor: 15.419

6.  A Minimum Quantum Chemistry CCSD(T)/CBS Data Set of Dimeric Interaction Energies for Small Organic Functional Groups: Heterodimers.

Authors:  Hsing-Hsiang Huang; Yi-Siang Wang; Sheng D Chao
Journal:  ACS Omega       Date:  2022-05-31

7.  Mechanistically Guided Design of Ligands That Significantly Improve the Efficiency of CuH-Catalyzed Hydroamination Reactions.

Authors:  Andy A Thomas; Klaus Speck; Ilia Kevlishvili; Zhaohong Lu; Peng Liu; Stephen L Buchwald
Journal:  J Am Chem Soc       Date:  2018-10-15       Impact factor: 15.419

8.  On atom-atom 'short contact' bonding interactions in crystals.

Authors:  Claude Lecomte; Enrique Espinosa; Cherif F Matta
Journal:  IUCrJ       Date:  2015-02-26       Impact factor: 4.769

9.  Playing with the weakest supramolecular interactions in a 3D crystalline hexakis[60]fullerene induces control over hydrogenation selectivity.

Authors:  Estefania Fernandez-Bartolome; Arturo Gamonal; José Santos; Saeed Khodabakhshi; Eider Rodríguez-Sánchez; E Carolina Sañudo; Nazario Martín; José Sánchez Costa
Journal:  Chem Sci       Date:  2021-05-18       Impact factor: 9.825

10.  Quantitative analysis of intermolecular interactions in orthorhombic rubrene.

Authors:  Venkatesha R Hathwar; Mattia Sist; Mads R V Jørgensen; Aref H Mamakhel; Xiaoping Wang; Christina M Hoffmann; Kunihisa Sugimoto; Jacob Overgaard; Bo Brummerstedt Iversen
Journal:  IUCrJ       Date:  2015-08-14       Impact factor: 4.769

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