Literature DB >> 21429907

Experimental demonstration of a two-phase population extinction hazard.

John M Drake1, Jeff Shapiro, Blaine D Griffen.   

Abstract

Population extinction is a fundamental biological process with applications to ecology, epidemiology, immunology, conservation biology and genetics. Although a monotonic relationship between initial population size and mean extinction time is predicted by virtually all theoretical models, attempts at empirical demonstration have been equivocal. We suggest that this anomaly is best explained with reference to the transient properties of ensembles of populations. Specifically, we submit that under experimental conditions, many populations escape their initially vulnerable state to reach quasi-stationarity, where effects of initial conditions are erased. Thus, extinction of populations initialized far from quasi-stationarity may be exposed to a two-phase extinction hazard. An empirical prediction of this theory is that the fit Cox proportional hazards regression model for the observed survival time distribution of a group of populations will be shown to violate the proportional hazards assumption early in the experiment, but not at later times. We report results of two experiments with the cladoceran zooplankton Daphnia magna designed to exhibit this phenomenon. In one experiment, habitat size was also varied. Statistical analysis showed that in one of these experiments a transformation occurred so that very early in the experiment there existed a transient phase during which the extinction hazard was primarily owing to the initial population size, and that this was gradually replaced by a more stable quasi-stationary phase. In the second experiment, only habitat size unambiguously displayed an effect. Analysis of data pooled from both experiments suggests that the overall extinction time distribution in this system results from the mixture of extinctions during the initial rapid phase, during which the effects of initial population size can be considerable, and a longer quasi-stationary phase, during which only habitat size has an effect. These are the first results, to our knowledge, of a two-phase population extinction process.

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Year:  2011        PMID: 21429907      PMCID: PMC3163422          DOI: 10.1098/rsif.2011.0024

Source DB:  PubMed          Journal:  J R Soc Interface        ISSN: 1742-5662            Impact factor:   4.118


  10 in total

1.  Extinction and quasi-stationarity in the Verhulst logistic model.

Authors:  I Nåsell
Journal:  J Theor Biol       Date:  2001-07-07       Impact factor: 2.691

2.  Quasi-stationary and ratio of expectations distributions: a comparative study.

Authors:  J R Artalejo; M J Lopez-Herrero
Journal:  J Theor Biol       Date:  2010-06-26       Impact factor: 2.691

3.  Experimental studies of extinction dynamics

Authors: 
Journal:  Science       Date:  1999-11-05       Impact factor: 47.728

4.  Experimental support of the scaling rule for demographic stochasticity.

Authors:  Robert A Desharnais; R F Costantino; J M Cushing; Shandelle M Henson; Brian Dennis; Aaron A King
Journal:  Ecol Lett       Date:  2006-05       Impact factor: 9.492

5.  Speed of expansion and extinction in experimental populations.

Authors:  John M Drake; Blaine D Griffen
Journal:  Ecol Lett       Date:  2009-05-13       Impact factor: 9.492

6.  Effects of habitat quality and size on extinction in experimental populations.

Authors:  Blaine D Griffen; John M Drake
Journal:  Proc Biol Sci       Date:  2008-10-07       Impact factor: 5.349

7.  Metapopulation extinction in fragmented landscapes: using bacteria and protozoa communities as model ecosystems.

Authors:  T V Burkey
Journal:  Am Nat       Date:  1997-11       Impact factor: 3.926

Review 8.  A review of extinction in experimental populations.

Authors:  Blaine D Griffen; John M Drake
Journal:  J Anim Ecol       Date:  2008-06-12       Impact factor: 5.091

9.  Extinction dynamics of age-structured populations in a fluctuating environment.

Authors:  R Lande; S H Orzack
Journal:  Proc Natl Acad Sci U S A       Date:  1988-10       Impact factor: 11.205

10.  On the extinction of a colonizing species.

Authors:  N Richter-Dyn; N S Goel
Journal:  Theor Popul Biol       Date:  1972-12       Impact factor: 1.570

  10 in total
  3 in total

1.  Extinction hazards in experimental Daphnia magna populations: effects of genotype diversity and environmental variation.

Authors:  John D Robinson; John P Wares; John M Drake
Journal:  Ecol Evol       Date:  2012-12-21       Impact factor: 2.912

2.  Experimental demonstration of accelerated extinction in source-sink metapopulations.

Authors:  John M Drake; Blaine D Griffen
Journal:  Ecol Evol       Date:  2013-08-22       Impact factor: 2.912

3.  Time-lag in extinction dynamics in experimental populations: evidence for a genetic Allee effect?

Authors:  Elodie Vercken; Flora Vincent; Ludovic Mailleret; Nicolas Ris; Elisabeth Tabone; Xavier Fauvergue
Journal:  J Anim Ecol       Date:  2013-02-07       Impact factor: 5.091

  3 in total

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