Literature DB >> 21422761

Where's the evidence?

Veronica J Vieland1.   

Abstract

Science is in large part the art of careful measurement, and a fixed measurement scale is the sine qua non of this art. It is obvious to us that measurement devices lacking fixed units and constancy of scale across applications are problematic, yet we seem oddly laissez faire in our approach to measurement of one critically important quantity: statistical evidence. Here I reconsider problems with reliance on p values or maximum LOD scores as measures of evidence, from a measure-theoretic perspective. I argue that the lack of an absolute scale for evidence measurement is every bit as problematic for modern biological research as was lack of an absolute thermal scale in pre-thermodynamic physics. Indeed, the difficulty of establishing properly calibrated evidence measures is strikingly similar to the problem 19th century physicists faced in deriving an absolute scale for the measurement of temperature. I propose that the formal relationship between the two problems might enable us to apply the mathematical foundations of thermodynamics to establish an absolute scale for the measurement of evidence, in statistical applications and possibly other areas of mathematical modeling as well. Here I begin to sketch out what such an endeavor might look like.
Copyright © 2011 S. Karger AG, Basel.

Mesh:

Year:  2011        PMID: 21422761      PMCID: PMC3078286          DOI: 10.1159/000324838

Source DB:  PubMed          Journal:  Hum Hered        ISSN: 0001-5652            Impact factor:   0.444


  7 in total

1.  Toward evidence-based medical statistics. 2: The Bayes factor.

Authors:  S N Goodman
Journal:  Ann Intern Med       Date:  1999-06-15       Impact factor: 25.391

2.  Toward evidence-based medical statistics. 1: The P value fallacy.

Authors:  S N Goodman
Journal:  Ann Intern Med       Date:  1999-06-15       Impact factor: 25.391

3.  The replication requirement.

Authors:  V J Vieland
Journal:  Nat Genet       Date:  2001-11       Impact factor: 38.330

4.  Expected monotonicity--a desirable property for evidence measures?

Authors:  Susan E Hodge; Veronica J Vieland
Journal:  Hum Hered       Date:  2010-07-21       Impact factor: 0.444

5.  Thermometers: something for statistical geneticists to think about.

Authors:  Veronica J Vieland
Journal:  Hum Hered       Date:  2006-06-12       Impact factor: 0.444

Review 6.  Non-replication of association studies: "pseudo-failures" to replicate?

Authors:  Prakash Gorroochurn; Susan E Hodge; Gary A Heiman; Martina Durner; David A Greenberg
Journal:  Genet Med       Date:  2007-06       Impact factor: 8.822

7.  Why most published research findings are false.

Authors:  John P A Ioannidis
Journal:  PLoS Med       Date:  2005-08-30       Impact factor: 11.613

  7 in total
  3 in total

1.  Measurement of statistical evidence on an absolute scale following thermodynamic principles.

Authors:  V J Vieland; J Das; S E Hodge; S-C Seok
Journal:  Theory Biosci       Date:  2013-03-05       Impact factor: 1.919

2.  KELVIN: a software package for rigorous measurement of statistical evidence in human genetics.

Authors:  Veronica J Vieland; Yungui Huang; Sang-Cheol Seok; John Burian; Umit Catalyurek; Jeffrey O'Connell; Alberto Segre; William Valentine-Cooper
Journal:  Hum Hered       Date:  2011-12-23       Impact factor: 0.444

3.  Replication of linkage at chromosome 20p13 and identification of suggestive sex-differential risk loci for autism spectrum disorder.

Authors:  Donna M Werling; Jennifer K Lowe; Rui Luo; Rita M Cantor; Daniel H Geschwind
Journal:  Mol Autism       Date:  2014-02-17       Impact factor: 7.509

  3 in total

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