Literature DB >> 21418220

Development and validation of the AmpFℓSTR® Identifiler® Direct PCR Amplification Kit: a multiplex assay for the direct amplification of single-source samples.

Dennis Y Wang1, Chien-Wei Chang, Robert E Lagacé, Nicola J Oldroyd, Lori K Hennessy.   

Abstract

The AmpFℓSTR(®) Identifiler(®) Direct PCR Amplification Kit is a new short tandem repeat multiplex assay optimized to allow the direct amplification of single-source blood and buccal samples on FTA(®) card without the need for sample purification and quantification. This multiplex assay has been validated according to the FBI/National Standards and SWGDAM guidelines. Validation results revealed that slight variations in primer concentration, master mix component concentration, and thermal cycling parameters did not affect the performance of the chemistry. The assay's sensitivity was demonstrated by amplifying known amounts of white blood cells spotted onto FTA(®) cards, and the assay's specificity was verified by establishing minimal cross-reactivity with nonhuman DNA. No effect on the age of the sample stored on the FTA(®) substrate was observed and full concordance was established in the population study. These findings of the validation study support the use of the Identifiler(®) Direct Kit for forensic standards and database samples genotyping.
© 2011 American Academy of Forensic Sciences.

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Year:  2011        PMID: 21418220     DOI: 10.1111/j.1556-4029.2011.01757.x

Source DB:  PubMed          Journal:  J Forensic Sci        ISSN: 0022-1198            Impact factor:   1.832


  10 in total

1.  Implications of direct amplification for measuring antimicrobial resistance using point-of-care devices.

Authors:  M R Williams; R D Stedtfeld; H Waseem; T Stedtfeld; B Upham; W Khalife; B Etchebarne; M Hughes; J M Tiedje; S A Hashsham
Journal:  Anal Methods       Date:  2017-01-31       Impact factor: 2.896

2.  DNA profiles from fingernails using direct PCR.

Authors:  Renée Ottens; Duncan Taylor; Adrian Linacre
Journal:  Forensic Sci Med Pathol       Date:  2014-11-13       Impact factor: 2.007

3.  Development and validation of a multiplex reaction analyzing eight miniSTRs of the X chromosome for identity and kinship testing with degraded DNA.

Authors:  María Castañeda; Adrián Odriozola; Javier Gómez; María T Zarrabeitia
Journal:  Int J Legal Med       Date:  2012-11-28       Impact factor: 2.686

4.  Allele frequencies for 15 autosomal STR loci and haplotype data for 17 Y-STR loci in a population from Belize.

Authors:  Shahida Flores; Jie Sun; Jonathan King; Arthur Eisenberg; Bruce Budowle
Journal:  Int J Legal Med       Date:  2014-09-06       Impact factor: 2.686

5.  Successful direct amplification of nuclear markers from a single hair follicle.

Authors:  Renée Ottens; Duncan Taylor; Damien Abarno; Adrian Linacre
Journal:  Forensic Sci Med Pathol       Date:  2012-12-30       Impact factor: 2.007

6.  Direct-to-PCR tissue preservation for DNA profiling.

Authors:  Amy Sorensen; Clare Berry; David Bruce; Michelle Elizabeth Gahan; Sheree Hughes-Stamm; Dennis McNevin
Journal:  Int J Legal Med       Date:  2015-11-03       Impact factor: 2.686

7.  Accurate typing of short tandem repeats from genome-wide sequencing data and its applications.

Authors:  Arkarachai Fungtammasan; Guruprasad Ananda; Suzanne E Hile; Marcia Shu-Wei Su; Chen Sun; Robert Harris; Paul Medvedev; Kristin Eckert; Kateryna D Makova
Journal:  Genome Res       Date:  2015-03-30       Impact factor: 9.043

8.  An evaluation of direct PCR amplification.

Authors:  Daniel E Hall; Reena Roy
Journal:  Croat Med J       Date:  2014-12       Impact factor: 1.351

9.  Protein Detection Using the Multiplexed Proximity Extension Assay (PEA) from Plasma and Vaginal Fluid Applied to the Indicating FTA Elute Micro Card™.

Authors:  Malin Berggrund; Daniel Ekman; Inger Gustavsson; Karin Sundfeldt; Matts Olovsson; Stefan Enroth; Ulf Gyllensten
Journal:  J Circ Biomark       Date:  2016-01-01

10.  Optimizing Release of Nucleic Acids of African Swine Fever Virus and Influenza A Virus from FTA Cards.

Authors:  Ahmed Elnagar; Timm C Harder; Sandra Blome; Martin Beer; Bernd Hoffmann
Journal:  Int J Mol Sci       Date:  2021-11-29       Impact factor: 5.923

  10 in total

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