Literature DB >> 21416541

Structural physiology based on electron crystallography.

Yoshinori Fujiyoshi1.   

Abstract

There are many questions in brain science, which are extremely interesting but very difficult to answer. For example, how do education and other experiences during human development influence the ability and personality of the adult? The molecular mechanisms underlying such phenomena are still totally unclear. However, technological and instrumental advancements of electron microscopy have facilitated comprehension of the structures of biological components, cells, and organelles. Electron crystallography is especially good for studying the structure and function of membrane proteins, which are key molecules of signal transduction in neural and other cells. Electron crystallography is now an established technique to analyze the structures of membrane proteins in lipid bilayers, which are close to their natural biological environment. By utilizing cryo-electron microscopes with helium cooled specimen stages, which were developed through a personal motivation to understand functions of neural systems from a structural point of view, structures of membrane proteins were analyzed at a resolution higher than 3 Å. This review has four objectives. First, it is intended to introduce the new research field of structural physiology. Second, it introduces some of the personal struggles, which were involved in developing the cryo-electron microscope. Third, it discusses some of the technology for the structural analysis of membrane proteins based on cryo-electron microscopy. Finally, it reviews structural and functional analyses of membrane proteins.

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Year:  2011        PMID: 21416541      PMCID: PMC3125865          DOI: 10.1002/pro.621

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  30 in total

1.  The voltage-sensitive sodium channel is a bell-shaped molecule with several cavities.

Authors:  C Sato; Y Ueno; K Asai; K Takahashi; M Sato; A Engel; Y Fujiyoshi
Journal:  Nature       Date:  2001-02-22       Impact factor: 49.962

2.  Chemistry of ion coordination and hydration revealed by a K+ channel-Fab complex at 2.0 A resolution.

Authors:  Y Zhou; J H Morais-Cabral; A Kaufman; R MacKinnon
Journal:  Nature       Date:  2001-11-01       Impact factor: 49.962

3.  Energetic optimization of ion conduction rate by the K+ selectivity filter.

Authors:  J H Morais-Cabral; Y Zhou; R MacKinnon
Journal:  Nature       Date:  2001-11-01       Impact factor: 49.962

4.  The principle of gating charge movement in a voltage-dependent K+ channel.

Authors:  Youxing Jiang; Vanessa Ruta; Jiayun Chen; Alice Lee; Roderick MacKinnon
Journal:  Nature       Date:  2003-05-01       Impact factor: 49.962

5.  Improved specimen preparation for cryo-electron microscopy using a symmetric carbon sandwich technique.

Authors:  Nobuhiko Gyobu; Kazutoshi Tani; Yoko Hiroaki; Akiko Kamegawa; Kaoru Mitsuoka; Yoshinori Fujiyoshi
Journal:  J Struct Biol       Date:  2004-06       Impact factor: 2.867

6.  Asymmetric configurations and N-terminal rearrangements in connexin26 gap junction channels.

Authors:  Atsunori Oshima; Kazutoshi Tani; Masoud M Toloue; Yoko Hiroaki; Amy Smock; Sayaka Inukai; Angela Cone; Bruce J Nicholson; Gina E Sosinsky; Yoshinori Fujiyoshi
Journal:  J Mol Biol       Date:  2010-11-20       Impact factor: 5.469

7.  Inter-subunit interaction of gastric H+,K+-ATPase prevents reverse reaction of the transport cycle.

Authors:  Kazuhiro Abe; Kazutoshi Tani; Tomohiro Nishizawa; Yoshinori Fujiyoshi
Journal:  EMBO J       Date:  2009-04-23       Impact factor: 11.598

8.  Arrangement and mobility of the voltage sensor domain in prokaryotic voltage-gated sodium channels.

Authors:  Takushi Shimomura; Katsumasa Irie; Hitoshi Nagura; Tomoya Imai; Yoshinori Fujiyoshi
Journal:  J Biol Chem       Date:  2010-12-22       Impact factor: 5.157

9.  Structural determinants of water permeation through aquaporin-1.

Authors:  K Murata; K Mitsuoka; T Hirai; T Walz; P Agre; J B Heymann; A Engel; Y Fujiyoshi
Journal:  Nature       Date:  2000-10-05       Impact factor: 49.962

10.  Mechanism of aquaporin-4's fast and highly selective water conduction and proton exclusion.

Authors:  Kazutoshi Tani; Tadanori Mitsuma; Yoko Hiroaki; Akiko Kamegawa; Kouki Nishikawa; Yukihiro Tanimura; Yoshinori Fujiyoshi
Journal:  J Mol Biol       Date:  2009-05-03       Impact factor: 5.469

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  3 in total

Review 1.  HIV-1 envelope glycoprotein biosynthesis, trafficking, and incorporation.

Authors:  Mary Ann Checkley; Benjamin G Luttge; Eric O Freed
Journal:  J Mol Biol       Date:  2011-07-22       Impact factor: 5.469

2.  Self-assembled lipid and membrane protein polyhedral nanoparticles.

Authors:  Tamara Basta; Hsin-Jui Wu; Mary K Morphew; Jonas Lee; Nilanjan Ghosh; Jeffrey Lai; John M Heumann; Keeshia Wang; Y C Lee; Douglas C Rees; Michael H B Stowell
Journal:  Proc Natl Acad Sci U S A       Date:  2013-12-30       Impact factor: 11.205

Review 3.  Structure and function of a silicic acid channel Lsi1.

Authors:  Yasunori Saitoh; Michihiro Suga
Journal:  Front Plant Sci       Date:  2022-09-12       Impact factor: 6.627

  3 in total

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