Literature DB >> 21410245

Construction of a structurally defined double-stranded DNA catenane.

Thorsten L Schmidt1, Alexander Heckel.   

Abstract

Topologically interlocked structures like catenanes and rotaxanes are promising components for the construction of molecular machines and motors. Herein we describe the construction of double-stranded DNA catenanes for DNA nanotechnology. For this, C-shaped DNA minicircle fragments were equipped with sequence-specific DNA-binding polyamides and their respective binding site. Formation of catenanes is achieved by self-assembly of two of these fragments and subsequent addition of a ring-closing oligonucleotide.

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Year:  2011        PMID： 21410245     DOI： 10.1021/nl200303m

Source DB:  PubMed          Journal:  Nano Lett        ISSN： 1530-6984            Impact factor:   11.189


  21 in total

Review 1.  Artificial Molecular Machines.

Authors:  Sundus Erbas-Cakmak; David A Leigh; Charlie T McTernan; Alina L Nussbaumer
Journal:  Chem Rev       Date:  2015-09-08       Impact factor: 60.622

2.  Structural optimization of pseudorotaxane-forming oligonucleotides for efficient and stable complex formation.

Authors:  Kazumitsu Onizuka; Takuya Miyashita; Tomoko Chikuni; Mamiko Ozawa; Hiroshi Abe; Fumi Nagatsugi
Journal:  Nucleic Acids Res       Date:  2018-09-28       Impact factor: 16.971

3.  Creating complex molecular topologies by configuring DNA four-way junctions.

Authors:  Di Liu; Gang Chen; Usman Akhter; Timothy M Cronin; Yossi Weizmann
Journal:  Nat Chem       Date:  2016-07-04       Impact factor: 24.427

4.  Facile Characterization of Topology of DNA Catenanes.

Authors:  Lin Li; Ran An; Jiaxuan Tang; Zhe Sui; Guoqing Wang; Makoto Komiyama; Xingguo Liang
Journal:  Biophys J       Date:  2020-02-15       Impact factor: 4.033

5.  Self-Assembly of Catenanes from Lasso Peptides.

Authors:  Caitlin D Allen; A James Link
Journal:  J Am Chem Soc       Date:  2016-10-21       Impact factor: 15.419

6.  Input-dependent induction of oligonucleotide structural motifs for performing molecular logic.

Authors:  Tao Li; Damian Ackermann; Anna M Hall; Michael Famulok
Journal:  J Am Chem Soc       Date:  2012-02-08       Impact factor: 15.419

7.  A Protein Rotaxane Controls the Translocation of Proteins Across a ClyA Nanopore.

Authors:  Annemie Biesemans; Misha Soskine; Giovanni Maglia
Journal:  Nano Lett       Date:  2015-08-07       Impact factor: 11.189

8.  Addressable and unidirectional energy transfer along a DNA three-way junction programmed by pyrrole-imidazole polyamides.

Authors:  Wu Su; Clive R Bagshaw; Glenn A Burley
Journal:  Sci Rep       Date:  2013       Impact factor: 4.379

9.  Efficient Synthesis of Peptide and Protein Functionalized Pyrrole-Imidazole Polyamides Using Native Chemical Ligation.

Authors:  Brian M G Janssen; Sven P F I van Ommeren; Maarten Merkx
Journal:  Int J Mol Sci       Date:  2015-06-04       Impact factor: 5.923

10.  Powering the programmed nanostructure and function of gold nanoparticles with catenated DNA machines.

Authors:  Johann Elbaz; Alessandro Cecconello; Zhiyuan Fan; Alexander O Govorov; Itamar Willner
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919
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