Literature DB >> 21405370

Mean field theory for nonequilibrium network reconstruction.

Yasser Roudi1, John Hertz.   

Abstract

There has been recent progress on inferring the structure of interactions in complex networks when they are in stationary states satisfying detailed balance, but little has been done for nonequilibrium systems. Here we introduce an approach to this problem, considering, as an example, the question of recovering the interactions in an asymmetrically coupled, synchronously updated Sherrington-Kirkpatrick model. We derive an exact iterative inversion algorithm and develop efficient approximations based on dynamical mean-field and Thouless-Anderson-Palmer equations that express the interactions in terms of equal-time and one-time-step-delayed correlation functions.

Year:  2011        PMID: 21405370     DOI: 10.1103/PhysRevLett.106.048702

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  24 in total

1.  Differential Covariance: A New Class of Methods to Estimate Sparse Connectivity from Neural Recordings.

Authors:  Tiger W Lin; Anup Das; Giri P Krishnan; Maxim Bazhenov; Terrence J Sejnowski
Journal:  Neural Comput       Date:  2017-08-04       Impact factor: 2.026

2.  Network inference in stochastic systems from neurons to currencies: Improved performance at small sample size.

Authors:  Danh-Tai Hoang; Juyong Song; Vipul Periwal; Junghyo Jo
Journal:  Phys Rev E       Date:  2019-02       Impact factor: 2.529

3.  Data-driven inference of hidden nodes in networks.

Authors:  Danh-Tai Hoang; Junghyo Jo; Vipul Periwal
Journal:  Phys Rev E       Date:  2019-04       Impact factor: 2.529

4.  The Ising decoder: reading out the activity of large neural ensembles.

Authors:  Michael T Schaub; Simon R Schultz
Journal:  J Comput Neurosci       Date:  2011-06-11       Impact factor: 1.621

5.  Dynamic graphical models of molecular kinetics.

Authors:  Simon Olsson; Frank Noé
Journal:  Proc Natl Acad Sci U S A       Date:  2019-07-08       Impact factor: 11.205

6.  Grid cells in an inhibitory network.

Authors:  Yasser Roudi; Edvard I Moser
Journal:  Nat Neurosci       Date:  2014-05       Impact factor: 24.884

7.  Gibbs distribution analysis of temporal correlations structure in retina ganglion cells.

Authors:  J C Vasquez; O Marre; A G Palacios; M J Berry; B Cessac
Journal:  J Physiol Paris       Date:  2011-11-17

8.  A unifying framework for mean-field theories of asymmetric kinetic Ising systems.

Authors:  Miguel Aguilera; S Amin Moosavi; Hideaki Shimazaki
Journal:  Nat Commun       Date:  2021-02-19       Impact factor: 14.919

9.  Scalability of Asynchronous Networks Is Limited by One-to-One Mapping between Effective Connectivity and Correlations.

Authors:  Sacha Jennifer van Albada; Moritz Helias; Markus Diesmann
Journal:  PLoS Comput Biol       Date:  2015-09-01       Impact factor: 4.475

Review 10.  Grid cells and cortical representation.

Authors:  Edvard I Moser; Yasser Roudi; Menno P Witter; Clifford Kentros; Tobias Bonhoeffer; May-Britt Moser
Journal:  Nat Rev Neurosci       Date:  2014-06-11       Impact factor: 34.870

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