Literature DB >> 2140530

An extensively edited mitochondrial transcript in kinetoplastids encodes a protein homologous to ATPase subunit 6.

G J Bhat1, D J Koslowsky, J E Feagin, B L Smiley, K Stuart.   

Abstract

The mitochondrial MURF4 gene of T. brucei has pronounced G versus C strand bias and heterogeneously sized transcripts, characteristic of genes encoding extensively edited transcripts. We find that MURF4 transcripts of T. brucei are extensively edited throughout by the addition and deletion of numerous uridines, creating potential initiation and termination codons and a continuous open reading frame. A potential guide RNA sequence occurs in a minicircle between inverted repeats. The 5' region of L. tarentolae MURF4 transcripts is also extensively edited, with a created initiation codon. The predicted MURF4 amino acid sequences have homology to those of mitochondrial ATP-ase subunit 6 genes from a variety of organisms. In addition, their hydropathic profiles are quite similar to those of other species. We therefore conclude that MURF4 encodes ATPase subunit 6 genes.

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Year:  1990        PMID: 2140530     DOI: 10.1016/0092-8674(90)90199-o

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  75 in total

1.  Uridylate addition and RNA ligation contribute to the specificity of kinetoplastid insertion RNA editing.

Authors:  R P Igo; S S Palazzo; M L Burgess; A K Panigrahi; K Stuart
Journal:  Mol Cell Biol       Date:  2000-11       Impact factor: 4.272

2.  Role of uridylate-specific exoribonuclease activity in Trypanosoma brucei RNA editing.

Authors:  Robert P Igo; David S Weston; Nancy Lewis Ernst; Aswini K Panigrahi; Reza Salavati; Kenneth Stuart
Journal:  Eukaryot Cell       Date:  2002-02

3.  Maxicircle CR1 transcripts of Trypanosoma brucei are edited and developmentally regulated and encode a putative iron-sulfur protein homologous to an NADH dehydrogenase subunit.

Authors:  A E Souza; P J Myler; K Stuart
Journal:  Mol Cell Biol       Date:  1992-05       Impact factor: 4.272

4.  Guide RNAs for transcripts with developmentally regulated RNA editing are present in both life cycle stages of Trypanosoma brucei.

Authors:  D J Koslowsky; G R Riley; J E Feagin; K Stuart
Journal:  Mol Cell Biol       Date:  1992-05       Impact factor: 4.272

Review 5.  RNA editing in trypanosomes. The us(e) of guide RNAs.

Authors:  R Benne
Journal:  Mol Biol Rep       Date:  1992-09       Impact factor: 2.316

6.  New nucleotide sequence data on the EMBL File Server.

Authors: 
Journal:  Nucleic Acids Res       Date:  1990-11-11       Impact factor: 16.971

7.  Trypanosoma brucei 20 S editosomes have one RNA substrate-binding site and execute RNA unwinding activity.

Authors:  Cordula Böhm; Venkata Subbaraju Katari; Michael Brecht; H Ulrich Göringer
Journal:  J Biol Chem       Date:  2012-06-01       Impact factor: 5.157

8.  TbRGG2 facilitates kinetoplastid RNA editing initiation and progression past intrinsic pause sites.

Authors:  Michelle L Ammerman; Vladimir Presnyak; John C Fisk; Bardees M Foda; Laurie K Read
Journal:  RNA       Date:  2010-09-20       Impact factor: 4.942

9.  Differential Editosome Protein Function between Life Cycle Stages of Trypanosoma brucei.

Authors:  Suzanne M McDermott; Xuemin Guo; Jason Carnes; Kenneth Stuart
Journal:  J Biol Chem       Date:  2015-08-24       Impact factor: 5.157

10.  Functional and structural analysis of AT-specific minor groove binders that disrupt DNA-protein interactions and cause disintegration of the Trypanosoma brucei kinetoplast.

Authors:  Cinthia R Millan; Francisco J Acosta-Reyes; Laura Lagartera; Godwin U Ebiloma; Leandro Lemgruber; J Jonathan Nué Martínez; Núria Saperas; Christophe Dardonville; Harry P de Koning; J Lourdes Campos
Journal:  Nucleic Acids Res       Date:  2017-08-21       Impact factor: 16.971

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