Literature DB >> 21405068

Microscale exoglycosidase processing and lectin capture of glycans with phospholipid assisted capillary electrophoresis separations.

S A Archer-Hartmann1, L M Sargent, D T Lowry, L A Holland.   

Abstract

Capillary electrophoresis separations of glycans labeled with 1-aminopyrene-3,6,8-trisulfonic acid were achieved with separation efficiencies ranging from 480,000 to 640,000 theoretical plates in a 60.2 cm, 25 μm inner diameter fused silica capillary. Under these separation conditions, the coefficient of variation in peak area is 10%, and if labeling efficiency is estimated at 100%, the limit of detection is 15 fM. The capillary electrophoresis method incorporated phospholipid additives to enhance the separation of glycans with slight differences in hydrodynamic volume. In addition, the phospholipid additives supported the integration of the lectin concanavalin A as well as the enzymes α1-2,3 mannosidase or β1-4 galactosidase to provide structural and compositional information about the glycans subject to separation. The use of in-capillary cleavage of terminal glycan residues with exoglycosidases offers a number of advantages over benchtop enzymatic sequencing, including reduced consumption of analyte, as well as enzyme. These methods were used to evaluate glycans derived from the glycoproteins α1-acid glycoprotein, fetuin, and ribonuclease B, as well as from glycoproteins collected from MCF7 cells.

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Year:  2011        PMID: 21405068     DOI: 10.1021/ac103362r

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  16 in total

1.  Aspergillus collagen-like genes (acl): identification, sequence polymorphism, and assessment for PCR-based pathogen detection.

Authors:  Kiril Tuntevski; Brandon C Durney; Anna K Snyder; P Rocco Lasala; Ajay P Nayak; Brett J Green; Donald H Beezhold; Rita V M Rio; Lisa A Holland; Slawomir Lukomski
Journal:  Appl Environ Microbiol       Date:  2013-10-11       Impact factor: 4.792

Review 2.  High-sensitivity analytical approaches for the structural characterization of glycoproteins.

Authors:  William R Alley; Benjamin F Mann; Milos V Novotny
Journal:  Chem Rev       Date:  2013-03-27       Impact factor: 60.622

3.  Microchip electrophoresis at elevated temperatures and high separation field strengths.

Authors:  Indranil Mitra; Steven P Marczak; Stephen C Jacobson
Journal:  Electrophoresis       Date:  2013-11-20       Impact factor: 3.535

4.  N-glycan profiling by microchip electrophoresis to differentiate disease states related to esophageal adenocarcinoma.

Authors:  Indranil Mitra; Zexi Zhuang; Yuening Zhang; Chuan-Yih Yu; Zane T Hammoud; Haixu Tang; Yehia Mechref; Stephen C Jacobson
Journal:  Anal Chem       Date:  2012-04-03       Impact factor: 6.986

5.  Capillary electrophoresis with stationary nanogel zones of galactosidase and Erythrina cristagalli lectin for the determination of β(1-3)-linked galactose in glycans.

Authors:  Lisa A Holland; Srikanth Gattu; Cassandra L Crihfield; Lloyd Bwanali
Journal:  J Chromatogr A       Date:  2017-06-16       Impact factor: 4.759

Review 6.  Clinical and pharmaceutical applications of affinity ligands in capillary electrophoresis: A review.

Authors:  Chenhua Zhang; Ashley G Woolfork; Kyungah Suh; Susan Ovbude; Cong Bi; Marawan Elzoeiry; David S Hage
Journal:  J Pharm Biomed Anal       Date:  2019-09-12       Impact factor: 3.935

7.  Structural Characterization of Serum N-Glycans by Methylamidation, Fluorescent Labeling, and Analysis by Microchip Electrophoresis.

Authors:  Indranil Mitra; Christa M Snyder; Xiaomei Zhou; Margit I Campos; William R Alley; Milos V Novotny; Stephen C Jacobson
Journal:  Anal Chem       Date:  2016-09-02       Impact factor: 6.986

8.  Comparative profiling of N-glycans isolated from serum samples of ovarian cancer patients and analyzed by microchip electrophoresis.

Authors:  Indranil Mitra; William R Alley; John A Goetz; Jacqueline A Vasseur; Milos V Novotny; Stephen C Jacobson
Journal:  J Proteome Res       Date:  2013-08-28       Impact factor: 4.466

9.  Capillary electrophoresis-mass spectrometry for direct structural identification of serum N-glycans.

Authors:  Christa M Snyder; Xiaomei Zhou; Jonathan A Karty; Bryan R Fonslow; Milos V Novotny; Stephen C Jacobson
Journal:  J Chromatogr A       Date:  2017-09-09       Impact factor: 4.759

Review 10.  Analytical glycobiology at high sensitivity: current approaches and directions.

Authors:  Milos V Novotny; William R Alley; Benjamin F Mann
Journal:  Glycoconj J       Date:  2012-09-04       Impact factor: 2.916

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