Literature DB >> 21398579

Context-dependent function of "GATA switch" sites in vivo.

Jonathan W Snow1, Jennifer J Trowbridge, Kirby D Johnson, Tohru Fujiwara, Nikla E Emambokus, Jeffrey A Grass, Stuart H Orkin, Emery H Bresnick.   

Abstract

Master transcriptional regulators of development often function through dispersed cis elements at endogenous target genes. While cis-elements are routinely studied in transfection and transgenic reporter assays, it is challenging to ascertain how they function in vivo. To address this problem in the context of the locus encoding the critical hematopoietic transcription factor Gata2, we engineered mice lacking a cluster of GATA motifs 2.8 kb upstream of the Gata2 transcriptional start site. We demonstrate that the -2.8 kb site confers maximal Gata2 expression in hematopoietic stem cells and specific hematopoietic progenitors. By contrast to our previous demonstration that a palindromic GATA motif at the neighboring -1.8 kb site maintains Gata2 repression in terminally differentiating erythroid cells, the -2.8 kb site was not required to initiate or maintain repression. These analyses reveal qualitatively distinct functions of 2 GATA motif-containing regions in vivo.

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Year:  2011        PMID: 21398579      PMCID: PMC3100688          DOI: 10.1182/blood-2010-10-313031

Source DB:  PubMed          Journal:  Blood        ISSN: 0006-4971            Impact factor:   22.113


  20 in total

1.  Haploinsufficiency of GATA-2 perturbs adult hematopoietic stem-cell homeostasis.

Authors:  Neil P Rodrigues; Viktor Janzen; Randolf Forkert; David M Dombkowski; Ashleigh S Boyd; Stuart H Orkin; Tariq Enver; Paresh Vyas; David T Scadden
Journal:  Blood       Date:  2005-04-05       Impact factor: 22.113

Review 2.  Developmental control via GATA factor interplay at chromatin domains.

Authors:  Emery H Bresnick; Melissa L Martowicz; Saumen Pal; Kirby D Johnson
Journal:  J Cell Physiol       Date:  2005-10       Impact factor: 6.384

Review 3.  Myeloid lineage commitment from the hematopoietic stem cell.

Authors:  Hiromi Iwasaki; Koichi Akashi
Journal:  Immunity       Date:  2007-06       Impact factor: 31.745

4.  Gata2, Fli1, and Scl form a recursively wired gene-regulatory circuit during early hematopoietic development.

Authors:  John E Pimanda; Katrin Ottersbach; Kathy Knezevic; Sarah Kinston; Wan Y I Chan; Nicola K Wilson; Josette-Renée Landry; Andrew D Wood; Anja Kolb-Kokocinski; Anthony R Green; David Tannahill; Georges Lacaud; Valerie Kouskoff; Berthold Göttgens
Journal:  Proc Natl Acad Sci U S A       Date:  2007-10-25       Impact factor: 11.205

5.  Improved prospective identification of megakaryocyte-erythrocyte progenitor cells.

Authors:  Michael A Rieger; Benjamin M Smejkal; Timm Schroeder
Journal:  Br J Haematol       Date:  2008-11-17       Impact factor: 6.998

6.  Enforced expression of the GATA-2 transcription factor blocks normal hematopoiesis.

Authors:  D A Persons; J A Allay; E R Allay; R A Ashmun; D Orlic; S M Jane; J M Cunningham; A W Nienhuis
Journal:  Blood       Date:  1999-01-15       Impact factor: 22.113

7.  Distinct functions of dispersed GATA factor complexes at an endogenous gene locus.

Authors:  Jeffrey A Grass; Huie Jing; Shin-Il Kim; Melissa L Martowicz; Saumen Pal; Gerd A Blobel; Emery H Bresnick
Journal:  Mol Cell Biol       Date:  2006-10       Impact factor: 4.272

8.  GATA motifs regulate early hematopoietic lineage-specific expression of the Gata2 gene.

Authors:  Maki Kobayashi-Osaki; Osamu Ohneda; Norio Suzuki; Naoko Minegishi; Tomomasa Yokomizo; Satoru Takahashi; Kim-Chew Lim; James Douglas Engel; Masayuki Yamamoto
Journal:  Mol Cell Biol       Date:  2005-08       Impact factor: 4.272

9.  The order of expression of transcription factors directs hierarchical specification of hematopoietic lineages.

Authors:  Hiromi Iwasaki; Shin-ichi Mizuno; Yojiro Arinobu; Hidetoshi Ozawa; Yasuo Mori; Hirokazu Shigematsu; Kiyoshi Takatsu; Daniel G Tenen; Koichi Akashi
Journal:  Genes Dev       Date:  2006-11-01       Impact factor: 11.361

10.  An early haematopoietic defect in mice lacking the transcription factor GATA-2.

Authors:  F Y Tsai; G Keller; F C Kuo; M Weiss; J Chen; M Rosenblatt; F W Alt; S H Orkin
Journal:  Nature       Date:  1994-09-15       Impact factor: 49.962

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  36 in total

Review 1.  Transcriptional mechanisms underlying hemoglobin synthesis.

Authors:  Koichi R Katsumura; Andrew W DeVilbiss; Nathaniel J Pope; Kirby D Johnson; Emery H Bresnick
Journal:  Cold Spring Harb Perspect Med       Date:  2013-09-01       Impact factor: 6.915

2.  Histone methyltransferase Setd8 represses Gata2 expression and regulates erythroid maturation.

Authors:  Jeffrey Malik; Michael Getman; Laurie A Steiner
Journal:  Mol Cell Biol       Date:  2015-04-06       Impact factor: 4.272

Review 3.  Blood disease-causing and -suppressing transcriptional enhancers: general principles and GATA2 mechanisms.

Authors:  Emery H Bresnick; Kirby D Johnson
Journal:  Blood Adv       Date:  2019-07-09

Review 4.  The GATA factor revolution in hematology.

Authors:  Koichi R Katsumura; Emery H Bresnick
Journal:  Blood       Date:  2017-02-08       Impact factor: 22.113

5.  SON protein regulates GATA-2 through transcriptional control of the microRNA 23a~27a~24-2 cluster.

Authors:  Erin Eun-Young Ahn; Tsunehito Higashi; Ming Yan; Shinobu Matsuura; Christopher J Hickey; Miao-Chia Lo; Wei-Jong Shia; Russell C DeKelver; Dong-Er Zhang
Journal:  J Biol Chem       Date:  2013-01-14       Impact factor: 5.157

Review 6.  Absence of a simple code: how transcription factors read the genome.

Authors:  Matthew Slattery; Tianyin Zhou; Lin Yang; Ana Carolina Dantas Machado; Raluca Gordân; Remo Rohs
Journal:  Trends Biochem Sci       Date:  2014-08-14       Impact factor: 13.807

7.  Epigenetic Determinants of Erythropoiesis: Role of the Histone Methyltransferase SetD8 in Promoting Erythroid Cell Maturation and Survival.

Authors:  Andrew W DeVilbiss; Rajendran Sanalkumar; Bryan D R Hall; Koichi R Katsumura; Isabela Fraga de Andrade; Emery H Bresnick
Journal:  Mol Cell Biol       Date:  2015-04-08       Impact factor: 4.272

8.  Mechanism governing a stem cell-generating cis-regulatory element.

Authors:  Rajendran Sanalkumar; Kirby D Johnson; Xin Gao; Meghan E Boyer; Yuan-I Chang; Kyle J Hewitt; Jing Zhang; Emery H Bresnick
Journal:  Proc Natl Acad Sci U S A       Date:  2014-03-10       Impact factor: 11.205

9.  GATA Factor-Regulated Samd14 Enhancer Confers Red Blood Cell Regeneration and Survival in Severe Anemia.

Authors:  Kyle J Hewitt; Koichi R Katsumura; Daniel R Matson; Prithvia Devadas; Nobuyuki Tanimura; Alexander S Hebert; Joshua J Coon; Jin-Soo Kim; Colin N Dewey; Sunduz Keles; Siyang Hao; Robert F Paulson; Emery H Bresnick
Journal:  Dev Cell       Date:  2017-08-07       Impact factor: 12.270

Review 10.  Transcription factor mutations as a cause of familial myeloid neoplasms.

Authors:  Jane E Churpek; Emery H Bresnick
Journal:  J Clin Invest       Date:  2019-02-01       Impact factor: 14.808

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