Literature DB >> 21368140

Combined transcriptome analysis of fetal human and mouse cerebral cortex exposed to alcohol.

Kazue Hashimoto-Torii1, Yuka Imamura Kawasawa, Alexandre Kuhn, Pasko Rakic.   

Abstract

Fetal exposure to environmental insults increases the susceptibility to late-onset neuropsychiatric disorders. Alcohol is listed as one of such prenatal environmental risk factors and known to exert devastating teratogenetic effects on the developing brain, leading to complex neurological and psychiatric symptoms observed in fetal alcohol spectrum disorder (FASD). Here, we performed a coordinated transcriptome analysis of human and mouse fetal cerebral cortices exposed to ethanol in vitro and in vivo, respectively. Up- and down-regulated genes conserved in the human and mouse models and the biological annotation of their expression profiles included many genes/terms related to neural development, such as cell proliferation, neuronal migration and differentiation, providing a reliable connection between the two species. Our data indicate that use of the combined rodent and human model systems provides an effective strategy to reveal and analyze gene expression changes inflicted by various physical and chemical environmental exposures during prenatal development. It also can potentially provide insight into the pathogenesis of environmentally caused brain disorders in humans.

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Year:  2011        PMID: 21368140      PMCID: PMC3053997          DOI: 10.1073/pnas.1100903108

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  56 in total

1.  Mouse brain organization revealed through direct genome-scale TF expression analysis.

Authors:  Paul A Gray; Hui Fu; Ping Luo; Qing Zhao; Jing Yu; Annette Ferrari; Toyoaki Tenzen; Dong-In Yuk; Eric F Tsung; Zhaohui Cai; John A Alberta; Le-Ping Cheng; Yang Liu; Jan M Stenman; M Todd Valerius; Nathan Billings; Haesun A Kim; Michael E Greenberg; Andrew P McMahon; David H Rowitch; Charles D Stiles; Qiufu Ma
Journal:  Science       Date:  2004-12-24       Impact factor: 47.728

2.  Satb2 regulates callosal projection neuron identity in the developing cerebral cortex.

Authors:  Elizabeth A Alcamo; Laura Chirivella; Marcel Dautzenberg; Gergana Dobreva; Isabel Fariñas; Rudolf Grosschedl; Susan K McConnell
Journal:  Neuron       Date:  2008-02-07       Impact factor: 17.173

3.  Satb2 is a postmitotic determinant for upper-layer neuron specification in the neocortex.

Authors:  Olga Britanova; Camino de Juan Romero; Amanda Cheung; Kenneth Y Kwan; Manuela Schwark; Andrea Gyorgy; Tanja Vogel; Sergey Akopov; Miso Mitkovski; Denes Agoston; Nenad Sestan; Zoltán Molnár; Victor Tarabykin
Journal:  Neuron       Date:  2008-02-07       Impact factor: 17.173

4.  Wnt-mediated self-renewal of neural stem/progenitor cells.

Authors:  M Yashar S Kalani; Samuel H Cheshier; Branden J Cord; Simon R Bababeygy; Hannes Vogel; Irving L Weissman; Theo D Palmer; Roel Nusse
Journal:  Proc Natl Acad Sci U S A       Date:  2008-10-28       Impact factor: 11.205

5.  Effects of alcohol on the generation and migration of cerebral cortical neurons.

Authors:  M W Miller
Journal:  Science       Date:  1986-09-19       Impact factor: 47.728

Review 6.  Neuronal migration, with special reference to developing human brain: a review.

Authors:  R L Sidman; P Rakic
Journal:  Brain Res       Date:  1973-11-09       Impact factor: 3.252

7.  Scrambler and yotari disrupt the disabled gene and produce a reeler-like phenotype in mice.

Authors:  M Sheldon; D S Rice; G D'Arcangelo; H Yoneshima; K Nakajima; K Mikoshiba; B W Howell; J A Cooper; D Goldowitz; T Curran
Journal:  Nature       Date:  1997-10-16       Impact factor: 49.962

Review 8.  Foetal Alcohol Spectrum Disorders and alterations in brain and behaviour.

Authors:  Consuelo Guerri; Alissa Bazinet; Edward P Riley
Journal:  Alcohol Alcohol       Date:  2009-01-15       Impact factor: 2.826

9.  The T-box transcription factor Eomes/Tbr2 regulates neurogenesis in the cortical subventricular zone.

Authors:  Sebastian J Arnold; Guo-Jen Huang; Amanda F P Cheung; Takumi Era; Shin-Ichi Nishikawa; Elizabeth K Bikoff; Zoltán Molnár; Elizabeth J Robertson; Matthias Groszer
Journal:  Genes Dev       Date:  2008-09-15       Impact factor: 11.361

10.  Lability of neuronal lineage decisions is revealed by acute exposures to ethanol.

Authors:  Michael W Miller; Huaiyu Hu
Journal:  Dev Neurosci       Date:  2009-04-17       Impact factor: 2.984

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  39 in total

1.  Evaluating methods for ranking differentially expressed genes applied to microArray quality control data.

Authors:  Koji Kadota; Kentaro Shimizu
Journal:  BMC Bioinformatics       Date:  2011-06-06       Impact factor: 3.169

2.  Alcohol exposure promotes DNA methyltransferase DNMT3A upregulation through reactive oxygen species-dependent mechanisms.

Authors:  Federico Miozzo; Hélène Arnould; Aurélie de Thonel; Anne-Laure Schang; Délara Sabéran-Djoneidi; Anne Baudry; Benoît Schneider; Valérie Mezger
Journal:  Cell Stress Chaperones       Date:  2017-07-15       Impact factor: 3.667

3.  Gene expression changes in C57BL/6J and DBA/2J mice following prenatal alcohol exposure.

Authors:  Chris Downing; Stephen Flink; Maria L Florez-McClure; Thomas E Johnson; Boris Tabakoff; Katerina J Kechris
Journal:  Alcohol Clin Exp Res       Date:  2012-04-24       Impact factor: 3.455

Review 4.  Post-transcriptional regulatory elements and spatiotemporal specification of neocortical stem cells and projection neurons.

Authors:  E M DeBoer; M L Kraushar; R P Hart; M-R Rasin
Journal:  Neuroscience       Date:  2013-05-30       Impact factor: 3.590

5.  Alcohol drinking inhibits NOTCH-PAX9 signaling in esophageal squamous epithelial cells.

Authors:  Menghan Shi; Shuang Ren; Hao Chen; Jing Li; Caizhi Huang; Yahui Li; Yuning Han; Yong Li; Zheng Sun; Xiaoxin Chen; Zhaohui Xiong
Journal:  J Pathol       Date:  2021-01-18       Impact factor: 7.996

6.  Detection of vulnerable neurons damaged by environmental insults in utero.

Authors:  Masaaki Torii; Masanori Sasaki; Yu-Wen Chang; Seiji Ishii; Stephen G Waxman; Jeffery D Kocsis; Pasko Rakic; Kazue Hashimoto-Torii
Journal:  Proc Natl Acad Sci U S A       Date:  2017-01-25       Impact factor: 11.205

7.  Prenatal ethanol exposure disrupts intraneocortical circuitry, cortical gene expression, and behavior in a mouse model of FASD.

Authors:  Hani El Shawa; Charles W Abbott; Kelly J Huffman
Journal:  J Neurosci       Date:  2013-11-27       Impact factor: 6.167

8.  Developmental Trajectories for Visuo-Spatial Attention are Altered by Prenatal Alcohol Exposure: A Longitudinal FMRI Study.

Authors:  P Gautam; S C Nuñez; K L Narr; S N Mattson; P A May; C M Adnams; E P Riley; K L Jones; E C Kan; E R Sowell
Journal:  Cereb Cortex       Date:  2014-08-04       Impact factor: 5.357

Review 9.  Molecular mechanisms of ethanol-associated oro-esophageal squamous cell carcinoma.

Authors:  Yao Liu; Hao Chen; Zheng Sun; Xiaoxin Chen
Journal:  Cancer Lett       Date:  2015-03-09       Impact factor: 8.679

10.  Intravenous Infusion of Mesenchymal Stem Cells Alters Motor Cortex Gene Expression in a Rat Model of Acute Spinal Cord Injury.

Authors:  Tsutomu Oshigiri; Toru Sasaki; Masanori Sasaki; Yuko Kataoka-Sasaki; Masahito Nakazaki; Shinichi Oka; Tomonori Morita; Ryosuke Hirota; Mitsunori Yoshimoto; Toshihiko Yamashita; Kazue Hashimoto-Torii; Osamu Honmou
Journal:  J Neurotrauma       Date:  2018-08-10       Impact factor: 5.269

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