Literature DB >> 21361661

Processing and rendering of Fourier domain optical coherence tomography images at a line rate over 524 kHz using a graphics processing unit.

Janarthanan Rasakanthan, Kate Sugden, Peter H Tomlins.   

Abstract

In Fourier domain optical coherence tomography (FD-OCT), a large amount of interference data needs to be resampled from the wavelength domain to the wavenumber domain prior to Fourier transformation. We present an approach to optimize this data processing, using a graphics processing unit (GPU) and parallel processing algorithms. We demonstrate an increased processing and rendering rate over that previously reported by using GPU paged memory to render data in the GPU rather than copying back to the CPU. This avoids unnecessary and slow data transfer, enabling a processing and display rate of well over 524,000 A-scan∕s for a single frame. To the best of our knowledge this is the fastest processing demonstrated to date and the first time that FD-OCT processing and rendering has been demonstrated entirely on a GPU.

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Year:  2011        PMID: 21361661     DOI: 10.1117/1.3548153

Source DB:  PubMed          Journal:  J Biomed Opt        ISSN: 1083-3668            Impact factor:   3.170


  9 in total

1.  High definition live 3D-OCT in vivo: design and evaluation of a 4D OCT engine with 1 GVoxel/s.

Authors:  Wolfgang Wieser; Wolfgang Draxinger; Thomas Klein; Sebastian Karpf; Tom Pfeiffer; Robert Huber
Journal:  Biomed Opt Express       Date:  2014-08-06       Impact factor: 3.732

Review 2.  High-speed OCT light sources and systems [Invited].

Authors:  Thomas Klein; Robert Huber
Journal:  Biomed Opt Express       Date:  2017-01-13       Impact factor: 3.732

3.  Parallelized multi-graphics processing unit framework for high-speed Gabor-domain optical coherence microscopy.

Authors:  Patrice Tankam; Anand P Santhanam; Kye-Sung Lee; Jungeun Won; Cristina Canavesi; Jannick P Rolland
Journal:  J Biomed Opt       Date:  2014-07       Impact factor: 3.170

4.  Real-time 3D and 4D Fourier domain Doppler optical coherence tomography based on dual graphics processing units.

Authors:  Yong Huang; Xuan Liu; Jin U Kang
Journal:  Biomed Opt Express       Date:  2012-08-20       Impact factor: 3.732

5.  GPU accelerated real-time multi-functional spectral-domain optical coherence tomography system at 1300 nm.

Authors:  Yan Wang; Christian M Oh; Michael C Oliveira; M Shahidul Islam; Arthur Ortega; B Hyle Park
Journal:  Opt Express       Date:  2012-07-02       Impact factor: 3.894

6.  Real-time three-dimensional optical coherence tomography image-guided core-needle biopsy system.

Authors:  Wei-Cheng Kuo; Jongsik Kim; Nathan D Shemonski; Eric J Chaney; Darold R Spillman; Stephen A Boppart
Journal:  Biomed Opt Express       Date:  2012-04-30       Impact factor: 3.732

7.  GPU-accelerated framework for intracoronary optical coherence tomography imaging at the push of a button.

Authors:  Myounghee Han; Kyunghun Kim; Sun-Joo Jang; Han Saem Cho; Brett E Bouma; Wang-Yuhl Oh; Sukyoung Ryu
Journal:  PLoS One       Date:  2015-04-16       Impact factor: 3.240

8.  Structural Analysis of Polymer Composites Using Spectral Domain Optical Coherence Tomography.

Authors:  Muhammad Faizan Shirazi; Mansik Jeon; Jeehyun Kim
Journal:  Sensors (Basel)       Date:  2017-05-18       Impact factor: 3.576

9.  Longitudinal correlation of 3D OCT to detect early stage erosion in bovine enamel.

Authors:  Abdirahman Aden; Paul Anderson; Gary R Burnett; Richard J M Lynch; Peter H Tomlins
Journal:  Biomed Opt Express       Date:  2017-01-18       Impact factor: 3.732

  9 in total

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