Literature DB >> 21359930

Periodic orbits in glycolytic oscillators: from elliptic orbits to relaxation oscillations.

T Roy1, J K Bhattacharjee, A K Mallik.   

Abstract

We consider the Sel'kov model of glycolytic oscillator for a quantitative study of the limit cycle oscillations in the system. We identify a region of parameter space where perturbation theory holds and use both Linstedt Poincaré technique and harmonic balance to obtain the shape and frequency of the limit cycle. The agreement with the numerically obtained result is excellent. We also find a different extreme, where the limit cycle is of the relaxation oscillator variety, has a large time period and it is seen that, as a particular parameter in the model is varied, the time period increases indefinitely. We characterize this divergence numerically. A calculational method is devised to capture the divergence approximately.

Mesh:

Year:  2011        PMID: 21359930     DOI: 10.1140/epje/i2011-11019-6

Source DB:  PubMed          Journal:  Eur Phys J E Soft Matter        ISSN: 1292-8941            Impact factor:   1.890


  11 in total

Review 1.  Computational approaches to cellular rhythms.

Authors:  Albert Goldbeter
Journal:  Nature       Date:  2002-11-14       Impact factor: 49.962

2.  Collapse and revival of glycolytic oscillation.

Authors:  Sandip Kar; Deb Shankar Ray
Journal:  Phys Rev Lett       Date:  2003-06-11       Impact factor: 9.161

3.  Temperature dependency and temperature compensation in a model of yeast glycolytic oscillations.

Authors:  Peter Ruoff; Melinda K Christensen; Jana Wolf; Reinhart Heinrich
Journal:  Biophys Chem       Date:  2003-11-01       Impact factor: 2.352

4.  Sustained simultaneous glycolytic and insulin oscillations in beta-cells.

Authors:  Sandip Kar; Deb Shankar Ray
Journal:  J Theor Biol       Date:  2005-11-07       Impact factor: 2.691

5.  Glycolytic oscillations in isolated rabbit ventricular myocytes.

Authors:  Jun-Hai Yang; Ling Yang; Zhilin Qu; James N Weiss
Journal:  J Biol Chem       Date:  2008-10-23       Impact factor: 5.157

6.  Self-oscillations in glycolysis. 1. A simple kinetic model.

Authors:  E E Sel'kov
Journal:  Eur J Biochem       Date:  1968-03

7.  Limit-cycle oscillations and chaos in reaction networks subject to conservation of mass.

Authors:  E Di Cera; P E Phillipson; J Wyman
Journal:  Proc Natl Acad Sci U S A       Date:  1989-01       Impact factor: 11.205

8.  Control of glycolytic oscillations by temperature.

Authors:  Thomas Mair; Christian Warnke; Kinko Tsuji; Stefan C Müller
Journal:  Biophys J       Date:  2004-10-15       Impact factor: 4.033

9.  Quantitative characterization of cell synchronization in yeast.

Authors:  Sune Danø; Mads Find Madsen; Preben Graae Sørensen
Journal:  Proc Natl Acad Sci U S A       Date:  2007-07-25       Impact factor: 11.205

10.  A model of phosphofructokinase and glycolytic oscillations in the pancreatic beta-cell.

Authors:  Pål O Westermark; Anders Lansner
Journal:  Biophys J       Date:  2003-07       Impact factor: 4.033

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