Literature DB >> 21357489

Genome sequence of Microbacterium testaceum StLB037, an N-acylhomoserine lactone-degrading bacterium isolated from potato leaves.

Tomohiro Morohoshi1, Wen-Zhao Wang, Nobutaka Someya, Tsukasa Ikeda.   

Abstract

Microbacterium testaceum is an endophytic Gram-positive bacterium that resides within plant hosts. M. testaceum StLB037 was isolated from potato leaves and shows N-acylhomoserine lactone-degrading activity. Here, we present the 3.98-Mb complete genome sequence of StLB037, with an average GC content of 70.28%.

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Year:  2011        PMID： 21357489      PMCID： PMC3133038          DOI： 10.1128/JB.00180-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  11 in total

Review 1.  Quorum sensing in plant-pathogenic bacteria.

Authors:  Susanne B Von Bodman; W Dietz Bauer; David L Coplin
Journal:  Annu Rev Phytopathol       Date:  2003-04-29       Impact factor: 13.078

2.  Basic local alignment search tool.

Authors:  S F Altschul; W Gish; W Miller; E W Myers; D J Lipman
Journal:  J Mol Biol       Date:  1990-10-05       Impact factor: 5.469

3.  AiiM, a novel class of N-acylhomoserine lactonase from the leaf-associated bacterium Microbacterium testaceum.

Authors:  Wen-Zhao Wang; Tomohiro Morohoshi; Masashi Ikenoya; Nobutaka Someya; Tsukasa Ikeda
Journal:  Appl Environ Microbiol       Date:  2010-02-19       Impact factor: 4.792

4.  Genome sequencing in microfabricated high-density picolitre reactors.

Authors:  Marcel Margulies; Michael Egholm; William E Altman; Said Attiya; Joel S Bader; Lisa A Bemben; Jan Berka; Michael S Braverman; Yi-Ju Chen; Zhoutao Chen; Scott B Dewell; Lei Du; Joseph M Fierro; Xavier V Gomes; Brian C Godwin; Wen He; Scott Helgesen; Chun Heen Ho; Chun He Ho; Gerard P Irzyk; Szilveszter C Jando; Maria L I Alenquer; Thomas P Jarvie; Kshama B Jirage; Jong-Bum Kim; James R Knight; Janna R Lanza; John H Leamon; Steven M Lefkowitz; Ming Lei; Jing Li; Kenton L Lohman; Hong Lu; Vinod B Makhijani; Keith E McDade; Michael P McKenna; Eugene W Myers; Elizabeth Nickerson; John R Nobile; Ramona Plant; Bernard P Puc; Michael T Ronan; George T Roth; Gary J Sarkis; Jan Fredrik Simons; John W Simpson; Maithreyan Srinivasan; Karrie R Tartaro; Alexander Tomasz; Kari A Vogt; Greg A Volkmer; Shally H Wang; Yong Wang; Michael P Weiner; Pengguang Yu; Richard F Begley; Jonathan M Rothberg
Journal:  Nature       Date:  2005-07-31       Impact factor: 49.962

Review 5.  Quorum sensing and quorum quenching: the yin and yang of bacterial communication.

Authors:  Stéphane Uroz; Yves Dessaux; Phil Oger
Journal:  Chembiochem       Date:  2009-01-26       Impact factor: 3.164

6.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

7.  Isolation and characterization of endophytic colonizing bacteria from agronomic crops and prairie plants.

Authors:  Denise K Zinniel; Pat Lambrecht; N Beth Harris; Zhengyu Feng; Daniel Kuczmarski; Phyllis Higley; Carol A Ishimaru; Alahari Arunakumari; Raúl G Barletta; Anne K Vidaver
Journal:  Appl Environ Microbiol       Date:  2002-05       Impact factor: 4.792

8.  Novel N-acylhomoserine lactone-degrading bacteria isolated from the leaf surface of Solanum tuberosum and their quorum-quenching properties.

Authors:  Tomohiro Morohoshi; Nobutaka Someya; Tsukasa Ikeda
Journal:  Biosci Biotechnol Biochem       Date:  2009-09-07       Impact factor: 2.043

9.  A Rhodococcus qsdA-encoded enzyme defines a novel class of large-spectrum quorum-quenching lactonases.

Authors:  Stéphane Uroz; Phil M Oger; Emilie Chapelle; Marie-Thérèse Adeline; Denis Faure; Yves Dessaux
Journal:  Appl Environ Microbiol       Date:  2008-01-11       Impact factor: 4.792

10.  MetaGeneAnnotator: detecting species-specific patterns of ribosomal binding site for precise gene prediction in anonymous prokaryotic and phage genomes.

Authors:  Hideki Noguchi; Takeaki Taniguchi; Takehiko Itoh
Journal:  DNA Res       Date:  2008-10-21       Impact factor: 4.458
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  24 in total

Review 1.  Phylogenetic framework and molecular signatures for the main clades of the phylum Actinobacteria.

Authors:  Beile Gao; Radhey S Gupta
Journal:  Microbiol Mol Biol Rev       Date:  2012-03       Impact factor: 11.056

2.  High-throughput screening of multispecies biofilm formation and quantitative PCR-based assessment of individual species proportions, useful for exploring interspecific bacterial interactions.

Authors:  Dawei Ren; Jonas Stenløkke Madsen; Claudia I de la Cruz-Perera; Lasse Bergmark; Søren J Sørensen; Mette Burmølle
Journal:  Microb Ecol       Date:  2013-12-12       Impact factor: 4.552

3.  Draft genome sequence for Microbacterium laevaniformans strain OR221, a bacterium tolerant to metals, nitrate, and low pH.

Authors:  Steven D Brown; Anthony V Palumbo; Nicolai Panikov; Thilini Ariyawansa; Dawn M Klingeman; Courtney M Johnson; Miriam L Land; Sagar M Utturkar; Slava S Epstein
Journal:  J Bacteriol       Date:  2012-06       Impact factor: 3.490

4.  Genome sequence of the biocontrol agent Microbacterium barkeri strain 2011-R4.

Authors:  Jian Liu; Qing Zhou; Muhammad Ibrahim; He Liu; Gulei Jin; Bo Zhu; Guanlin Xie
Journal:  J Bacteriol       Date:  2012-12       Impact factor: 3.490

5.  Genome sequence of Microbacterium yannicii, a bacterium isolated from a cystic fibrosis patient.

Authors:  Poonam Sharma; Seydina M Diene; Gregory Gimenez; Catherine Robert; Jean-Marc Rolain
Journal:  J Bacteriol       Date:  2012-09       Impact factor: 3.490

6.  Identification of the enzyme responsible for N-acetylation of norfloxacin by Microbacterium sp. Strain 4N2-2.

Authors:  Dae-Wi Kim; Jinhui Feng; Huizhong Chen; Ohgew Kweon; Yuan Gao; Li-Rong Yu; Vanessa J Burrowes; John B Sutherland
Journal:  Appl Environ Microbiol       Date:  2012-10-26       Impact factor: 4.792

7.  Comparative pathogenomics reveals horizontally acquired novel virulence genes in fungi infecting cereal hosts.

Authors:  Donald M Gardiner; Megan C McDonald; Lorenzo Covarelli; Peter S Solomon; Anca G Rusu; Mhairi Marshall; Kemal Kazan; Sukumar Chakraborty; Bruce A McDonald; John M Manners
Journal:  PLoS Pathog       Date:  2012-09-27       Impact factor: 6.823

8.  Draft Genome Sequence of Microbacterium sp. Strain UCD-TDU (Phylum Actinobacteria).

Authors:  Zachary A Bendiks; Jenna M Lang; Aaron E Darling; Jonathan A Eisen; David A Coil
Journal:  Genome Announc       Date:  2013-03-21

Review 9.  Quorum quenching enzymes and their application in degrading signal molecules to block quorum sensing-dependent infection.

Authors:  Fang Chen; Yuxin Gao; Xiaoyi Chen; Zhimin Yu; Xianzhen Li
Journal:  Int J Mol Sci       Date:  2013-08-26       Impact factor: 5.923

10.  Phenotypic and genotypic properties of Microbacterium yannicii, a recently described multidrug resistant bacterium isolated from a lung transplanted patient with cystic fibrosis in France.

Authors:  Poonam Sharma; Seydina M Diene; Sandrine Thibeaut; Fadi Bittar; Véronique Roux; Carine Gomez; Martine Reynaud-Gaubert; Jean-Marc Rolain
Journal:  BMC Microbiol       Date:  2013-05-03       Impact factor: 3.605
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