Literature DB >> 21354362

RNA localization in bacteria.

Kenneth C Keiler1.   

Abstract

Bacteria localize proteins and DNA regions to specific subcellular sites, and several recent publications show that RNAs are localized within the cell as well. Localization of tmRNA and some mRNAs indicates that RNAs can be sequestered at specific sites by RNA binding proteins, or can be trapped at the location where they are transcribed. Although the functions of RNA localization are not yet completely understood, it appears that one function of RNA localization is to regulate RNA abundance by controlling access to nucleases. New techniques for visualizing RNAs will likely lead to increased examination of spatial control of RNAs and the role this control plays in the regulation of gene expression and bacterial physiology.
Copyright © 2011 Elsevier Ltd. All rights reserved.

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Year:  2011        PMID: 21354362      PMCID: PMC3078976          DOI: 10.1016/j.mib.2011.01.009

Source DB:  PubMed          Journal:  Curr Opin Microbiol        ISSN: 1369-5274            Impact factor:   7.934


  40 in total

1.  Control of cell shape in bacteria: helical, actin-like filaments in Bacillus subtilis.

Authors:  L J Jones; R Carballido-López; J Errington
Journal:  Cell       Date:  2001-03-23       Impact factor: 41.582

2.  FlbT, the post-transcriptional regulator of flagellin synthesis in Caulobacter crescentus, interacts with the 5' untranslated region of flagellin mRNA.

Authors:  P E Anderson; J W Gober
Journal:  Mol Microbiol       Date:  2000-10       Impact factor: 3.501

3.  Expression of the glucose transporter gene, ptsG, is regulated at the mRNA degradation step in response to glycolytic flux in Escherichia coli.

Authors:  K Kimata; Y Tanaka; T Inada; H Aiba
Journal:  EMBO J       Date:  2001-07-02       Impact factor: 11.598

4.  tmRNA in Caulobacter crescentus is cell cycle regulated by temporally controlled transcription and RNA degradation.

Authors:  Kenneth C Keiler; Lucy Shapiro
Journal:  J Bacteriol       Date:  2003-03       Impact factor: 3.490

Review 5.  Dynamic localization of bacterial and plasmid chromosomes.

Authors:  S Hiraga
Journal:  Annu Rev Genet       Date:  2000       Impact factor: 16.830

6.  Rapid and sequential movement of individual chromosomal loci to specific subcellular locations during bacterial DNA replication.

Authors:  Patrick H Viollier; Martin Thanbichler; Patrick T McGrath; Lisandra West; Maliwan Meewan; Harley H McAdams; Lucy Shapiro
Journal:  Proc Natl Acad Sci U S A       Date:  2004-06-03       Impact factor: 11.205

Review 7.  Bacterial small RNA regulators: versatile roles and rapidly evolving variations.

Authors:  Susan Gottesman; Gisela Storz
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-12-01       Impact factor: 10.005

8.  Tagging ribosomal protein S7 allows rapid identification of mutants defective in assembly and function of 30 S subunits.

Authors:  K Fredrick; G M Dunny; H F Noller
Journal:  J Mol Biol       Date:  2000-05-05       Impact factor: 5.469

9.  Two types of localization of the DNA-binding proteins within the Escherichia coli nucleoid.

Authors:  T A Azam; S Hiraga; A Ishihama
Journal:  Genes Cells       Date:  2000-08       Impact factor: 1.891

Review 10.  Riboswitch RNAs: regulation of gene expression by direct monitoring of a physiological signal.

Authors:  Angela M Smith; Ryan T Fuchs; Frank J Grundy; Tina M Henkin
Journal:  RNA Biol       Date:  2010-01-25       Impact factor: 4.652

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  12 in total

Review 1.  Control of cell migration through mRNA localization and local translation.

Authors:  Guoning Liao; Lisa Mingle; Livingston Van De Water; Gang Liu
Journal:  Wiley Interdiscip Rev RNA       Date:  2014-09-28       Impact factor: 9.957

Review 2.  Principles and roles of mRNA localization in animal development.

Authors:  Caroline Medioni; Kimberly Mowry; Florence Besse
Journal:  Development       Date:  2012-09       Impact factor: 6.868

Review 3.  RNA Localization in Bacteria.

Authors:  Jingyi Fei; Cynthia M Sharma
Journal:  Microbiol Spectr       Date:  2018-09

4.  Live Cell Imaging of Endogenous mRNA Using RNA-Based Fluorescence "Turn-On" Probe.

Authors:  Wei Qiang Ong; Y Rose Citron; Sayaka Sekine; Bo Huang
Journal:  ACS Chem Biol       Date:  2016-12-07       Impact factor: 5.100

Review 5.  Enzymes Involved in Posttranscriptional RNA Metabolism in Gram-Negative Bacteria.

Authors:  Bijoy K Mohanty; Sidney R Kushner
Journal:  Microbiol Spectr       Date:  2018-04

6.  Subcellular knockout of importin β1 perturbs axonal retrograde signaling.

Authors:  Rotem Ben-Tov Perry; Ella Doron-Mandel; Elena Iavnilovitch; Ida Rishal; Shachar Y Dagan; Michael Tsoory; Giovanni Coppola; Marguerite K McDonald; Cynthia Gomes; Daniel H Geschwind; Jeffery L Twiss; Avraham Yaron; Mike Fainzilber
Journal:  Neuron       Date:  2012-07-26       Impact factor: 17.173

Review 7.  Remote control of gene function by local translation.

Authors:  Hosung Jung; Christos G Gkogkas; Nahum Sonenberg; Christine E Holt
Journal:  Cell       Date:  2014-03-27       Impact factor: 41.582

8.  Discovery and biological characterization of geranylated RNA in bacteria.

Authors:  Christoph E Dumelin; Yiyun Chen; Aaron M Leconte; Y Grace Chen; David R Liu
Journal:  Nat Chem Biol       Date:  2012-09-16       Impact factor: 15.040

Review 9.  Initiation of mRNA decay in bacteria.

Authors:  Soumaya Laalami; Léna Zig; Harald Putzer
Journal:  Cell Mol Life Sci       Date:  2013-09-25       Impact factor: 9.261

10.  The CsrA-FliW network controls polar localization of the dual-function flagellin mRNA in Campylobacter jejuni.

Authors:  Gaurav Dugar; Sarah L Svensson; Thorsten Bischler; Sina Wäldchen; Richard Reinhardt; Markus Sauer; Cynthia M Sharma
Journal:  Nat Commun       Date:  2016-05-27       Impact factor: 14.919

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