Literature DB >> 21351772

Water ordering at membrane interfaces controls fusion dynamics.

Peter M Kasson1, Erik Lindahl, Vijay S Pande.   

Abstract

Membrane interfaces are critical to many cellular functions, yet the vast array of molecular components involved make the fundamental physics of interaction difficult to define. Water has been shown to play an important role in the dynamics of small biological systems, for example when trapped in hydrophobic regions, but the molecular details of water have generally been thought dispensable when considering large membrane interfaces. Nevertheless, spectroscopic data indicate that water has distinct, ordered behavior near membrane surfaces. While coarse-grained simulations have achieved success recently in aiding understanding the dynamics of membrane assemblies, it is natural to ask, does the missing chemical nature of water play an important role? We have therefore performed atomic-resolution simulations of vesicle fusion to understand the role of chemical detail, particularly the molecular structure of water, in membrane fusion and at membrane interfaces more generally. These membrane interfaces present a form of hydrophilic confinement, yielding surprising, non-bulk-like water behavior.

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Year:  2011        PMID: 21351772     DOI: 10.1021/ja200310d

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  12 in total

1.  Activation thermodynamics of poly(ethylene glycol)-mediated model membrane fusion support mechanistic models of stalk and pore formation.

Authors:  Hirak Chakraborty; Pradip K Tarafdar; Michael J Bruno; Tanusree Sengupta; Barry R Lentz
Journal:  Biophys J       Date:  2012-06-19       Impact factor: 4.033

2.  A comparison of coarse-grained and continuum models for membrane bending in lipid bilayer fusion pores.

Authors:  Jejoong Yoo; Meyer B Jackson; Qiang Cui
Journal:  Biophys J       Date:  2013-02-19       Impact factor: 4.033

3.  Wild-type and mutant hemagglutinin fusion peptides alter bilayer structure as well as kinetics and activation thermodynamics of stalk and pore formation differently: mechanistic implications.

Authors:  Hirak Chakraborty; Pradip K Tarafdar; David G Klapper; Barry R Lentz
Journal:  Biophys J       Date:  2013-12-03       Impact factor: 4.033

4.  Thermodynamically reversible paths of the first fusion intermediate reveal an important role for membrane anchors of fusion proteins.

Authors:  Yuliya G Smirnova; Herre Jelger Risselada; Marcus Müller
Journal:  Proc Natl Acad Sci U S A       Date:  2019-01-30       Impact factor: 11.205

5.  Influenza hemagglutinin drives viral entry via two sequential intramembrane mechanisms.

Authors:  Anna Pabis; Robert J Rawle; Peter M Kasson
Journal:  Proc Natl Acad Sci U S A       Date:  2020-03-18       Impact factor: 11.205

6.  Phosphatidylserine inhibits and calcium promotes model membrane fusion.

Authors:  Pradip K Tarafdar; Hirak Chakraborty; S Moses Dennison; Barry R Lentz
Journal:  Biophys J       Date:  2012-11-07       Impact factor: 4.033

7.  Line-tension controlled mechanism for influenza fusion.

Authors:  Herre Jelger Risselada; Giovanni Marelli; Marc Fuhrmans; Yuliya G Smirnova; Helmut Grubmüller; Siewert Jan Marrink; Marcus Müller
Journal:  PLoS One       Date:  2012-06-28       Impact factor: 3.240

Review 8.  Computational Modeling of Realistic Cell Membranes.

Authors:  Siewert J Marrink; Valentina Corradi; Paulo C T Souza; Helgi I Ingólfsson; D Peter Tieleman; Mark S P Sansom
Journal:  Chem Rev       Date:  2019-01-09       Impact factor: 72.087

9.  Coupled diffusion in lipid bilayers upon close approach.

Authors:  Sander Pronk; Erik Lindahl; Peter M Kasson
Journal:  J Am Chem Soc       Date:  2015-01-06       Impact factor: 15.419

10.  Lipid tail protrusion in simulations predicts fusogenic activity of influenza fusion peptide mutants and conformational models.

Authors:  Per Larsson; Peter M Kasson
Journal:  PLoS Comput Biol       Date:  2013-03-07       Impact factor: 4.475

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