Literature DB >> 21349872

The MEMPACK alpha-helical transmembrane protein structure prediction server.

Timothy Nugent1, Sean Ward, David T Jones.   

Abstract

MOTIVATION: The experimental difficulties of alpha-helical transmembrane protein structure determination make this class of protein an important target for sequence-based structure prediction tools. The MEMPACK prediction server allows users to submit a transmembrane protein sequence and returns transmembrane topology, lipid exposure, residue contacts, helix-helix interactions and helical packing arrangement predictions in both plain text and graphical formats using a number of novel machine learning-based algorithms. AVAILABILITY: The server can be accessed as a new component of the PSIPRED portal by at http://bioinf.cs.ucl.ac.uk/psipred/.

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Year:  2011        PMID： 21349872      PMCID： PMC3087951          DOI： 10.1093/bioinformatics/btr096

Source DB:  PubMed          Journal:  Bioinformatics        ISSN： 1367-4803            Impact factor:   6.937


  6 in total

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