Literature DB >> 21348520

Single-step charge transport through DNA over long distances.

Joseph C Genereux1, Stephanie M Wuerth, Jacqueline K Barton.   

Abstract

Quantum yields for charge transport across adenine tracts of increasing length have been measured by monitoring hole transport in synthetic oligonucleotides between photoexcited 2-aminopurine, a fluorescent analogue of adenine, and N(2)-cyclopropyl guanine. Using fluorescence quenching, a measure of hole injection, and hole trapping by the cyclopropyl guanine derivative, we separate the individual contributions of single- and multistep channels to DNA charge transport and find that with 7 or 8 intervening adenines the charge transport is a coherent, single-step process. Moreover, a transition occurs from multistep to single-step charge transport with increasing donor/acceptor separation, opposite to that generally observed in molecular wires. These results establish that coherent transport through DNA occurs preferentially across 10 base pairs, favored by delocalization over a full turn of the helix.

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Year:  2011        PMID: 21348520      PMCID: PMC3079569          DOI: 10.1021/ja107033v

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  59 in total

1.  Ultrafast dynamics in DNA-mediated electron transfer: base gating and the role of temperature.

Authors:  Melanie A O'Neill; Hans-Christian Becker; Chaozhi Wan; Jacqueline K Barton; Ahmed H Zewail
Journal:  Angew Chem Int Ed Engl       Date:  2003       Impact factor: 15.336

2.  Mechanism for radical cation transport in duplex DNA oligonucleotides.

Authors:  Chu-Sheng Liu; Rigoberto Hernandez; Gary B Schuster
Journal:  J Am Chem Soc       Date:  2004-03-10       Impact factor: 15.419

3.  DNA-mediated charge transport requires conformational motion of the DNA bases: elimination of charge transport in rigid glasses at 77 K.

Authors:  Melanie A O'Neill; Jacqueline K Barton
Journal:  J Am Chem Soc       Date:  2004-10-20       Impact factor: 15.419

4.  Long-range oxidative damage to cytosines in duplex DNA.

Authors:  Fangwei Shao; Melanie A O'Neill; Jacqueline K Barton
Journal:  Proc Natl Acad Sci U S A       Date:  2004-12-16       Impact factor: 11.205

Review 5.  Electron transfer processes in DNA: mechanisms, biological relevance and applications in DNA analytics.

Authors:  Hans-Achim Wagenknecht
Journal:  Nat Prod Rep       Date:  2006-08-30       Impact factor: 13.423

6.  A Monte Carlo study of charge transfer in DNA.

Authors:  Mattias Jakobsson; Sven Stafström
Journal:  J Chem Phys       Date:  2008-09-28       Impact factor: 3.488

7.  Distance dependence of the charge transfer rate for peptide nucleic acid monolayers.

Authors:  Amit Paul; Richard M Watson; Emil Wierzbinski; Kathryn L Davis; Allen Sha; Catalina Achim; David H Waldeck
Journal:  J Phys Chem B       Date:  2009-08-19       Impact factor: 2.991

8.  Evidence of formation of adenine dimer cation radical in DNA: the importance of adenine base stacking.

Authors:  Kazuo Kobayashi
Journal:  J Phys Chem B       Date:  2010-04-29       Impact factor: 2.991

Review 9.  DNA-mediated electrochemistry.

Authors:  Alon A Gorodetsky; Marisa C Buzzeo; Jacqueline K Barton
Journal:  Bioconjug Chem       Date:  2008-12       Impact factor: 4.774

10.  Challenges in distinguishing superexchange and hopping mechanisms of intramolecular charge transfer through fluorene oligomers.

Authors:  Randall H Goldsmith; Orlando DeLeon; Thea M Wilson; Daniel Finkelstein-Shapiro; Mark A Ratner; Michael R Wasielewski
Journal:  J Phys Chem A       Date:  2008-04-18       Impact factor: 2.781

View more
  10 in total

1.  Impact of a single base pair substitution on the charge transfer rate along short DNA hairpins.

Authors:  Nicolas Renaud; Yuri A Berlin; Mark A Ratner
Journal:  Proc Natl Acad Sci U S A       Date:  2013-08-26       Impact factor: 11.205

2.  Charge photoinjection in intercalated and covalently bound [Re(CO)3(dppz)(py)]+-DNA constructs monitored by time-resolved visible and infrared spectroscopy.

Authors:  Eric D Olmon; Pamela A Sontz; Ana María Blanco-Rodríguez; Michael Towrie; Ian P Clark; Antonín Vlček; Jacqueline K Barton
Journal:  J Am Chem Soc       Date:  2011-08-09       Impact factor: 15.419

3.  Molecular rectifier composed of DNA with high rectification ratio enabled by intercalation.

Authors:  Cunlan Guo; Kun Wang; Elinor Zerah-Harush; Joseph Hamill; Bin Wang; Yonatan Dubi; Bingqian Xu
Journal:  Nat Chem       Date:  2016-04-04       Impact factor: 24.427

4.  Metal Complexes for DNA-Mediated Charge Transport.

Authors:  Jacqueline K Barton; Eric D Olmon; Pamela A Sontz
Journal:  Coord Chem Rev       Date:  2011-04-01       Impact factor: 22.315

Review 5.  DNA Charge Transport: from Chemical Principles to the Cell.

Authors:  Anna R Arnold; Michael A Grodick; Jacqueline K Barton
Journal:  Cell Chem Biol       Date:  2016-01-21       Impact factor: 8.116

6.  Independent Generation of Reactive Intermediates Leads to an Alternative Mechanism for Strand Damage Induced by Hole Transfer in Poly(dA-T) Sequences.

Authors:  Huabing Sun; Liwei Zheng; Marc M Greenberg
Journal:  J Am Chem Soc       Date:  2018-08-31       Impact factor: 15.419

Review 7.  Solution, surface, and single molecule platforms for the study of DNA-mediated charge transport.

Authors:  Natalie B Muren; Eric D Olmon; Jacqueline K Barton
Journal:  Phys Chem Chem Phys       Date:  2012-07-31       Impact factor: 3.676

8.  Hole Transport in A-form DNA/RNA Hybrid Duplexes.

Authors:  Jiun Ru Wong; Fangwei Shao
Journal:  Sci Rep       Date:  2017-01-13       Impact factor: 4.379

9.  Length-independent transport rates in biomolecules by quantum mechanical unfurling.

Authors:  Ariel D Levine; Michael Iv; Uri Peskin
Journal:  Chem Sci       Date:  2015-11-20       Impact factor: 9.825

Review 10.  The Dynamics of Hole Transfer in DNA.

Authors:  Andrea Peluso; Tonino Caruso; Alessandro Landi; Amedeo Capobianco
Journal:  Molecules       Date:  2019-11-07       Impact factor: 4.411

  10 in total

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