Literature DB >> 21339841

Public sharing of research datasets: a pilot study of associations.

Heather A Piwowar1, Wendy W Chapman.   

Abstract

The public sharing of primary research datasets potentially benefits the research community but is not yet common practice. In this pilot study, we analyzed whether data sharing frequency was associated with funder and publisher requirements, journal impact factor, or investigator experience and impact. Across 397 recent biomedical microarray studies, we found investigators were more likely to publicly share their raw dataset when their study was published in a high-impact journal and when the first or last authors had high levels of career experience and impact. We estimate the USA's National Institutes of Health (NIH) data sharing policy applied to 19% of the studies in our cohort; being subject to the NIH data sharing plan requirement was not found to correlate with increased data sharing behavior in multivariate logistic regression analysis. Studies published in journals that required a database submission accession number as a condition of publication were more likely to share their data, but this trend was not statistically significant. These early results will inform our ongoing larger analysis, and hopefully contribute to the development of more effective data sharing initiatives.

Entities:  

Year:  2010        PMID: 21339841      PMCID: PMC3039489          DOI: 10.1016/j.joi.2009.11.010

Source DB:  PubMed          Journal:  J Informetr        ISSN: 1751-1577            Impact factor:   5.107


  25 in total

1.  Minimum information about a microarray experiment (MIAME)-toward standards for microarray data.

Authors:  A Brazma; P Hingamp; J Quackenbush; G Sherlock; P Spellman; C Stoeckert; J Aach; W Ansorge; C A Ball; H C Causton; T Gaasterland; P Glenisson; F C Holstege; I F Kim; V Markowitz; J C Matese; H Parkinson; A Robinson; U Sarkans; S Schulze-Kremer; J Stewart; R Taylor; J Vilo; M Vingron
Journal:  Nat Genet       Date:  2001-12       Impact factor: 38.330

2.  Data sharing in medical research: an empirical investigation.

Authors:  D D Reidpath; P A Allotey
Journal:  Bioethics       Date:  2001-04       Impact factor: 1.898

3.  Microarray standards at last.

Authors: 
Journal:  Nature       Date:  2002-09-26       Impact factor: 49.962

4.  An index to quantify an individual's scientific research output.

Authors:  J E Hirsch
Journal:  Proc Natl Acad Sci U S A       Date:  2005-11-07       Impact factor: 11.205

5.  Data withholding in genetics and the other life sciences: prevalences and predictors.

Authors:  David Blumenthal; Eric G Campbell; Manjusha Gokhale; Recai Yucel; Brian Clarridge; Stephen Hilgartner; Neil A Holtzman
Journal:  Acad Med       Date:  2006-02       Impact factor: 6.893

6.  New models of collaboration in genome-wide association studies: the Genetic Association Information Network.

Authors:  Teri A Manolio; Laura Lyman Rodriguez; Lisa Brooks; Gonçalo Abecasis; Dennis Ballinger; Mark Daly; Peter Donnelly; Stephen V Faraone; Kelly Frazer; Stacey Gabriel; Pablo Gejman; Alan Guttmacher; Emily L Harris; Thomas Insel; John R Kelsoe; Eric Lander; Norma McCowin; Matthew D Mailman; Elizabeth Nabel; James Ostell; Elizabeth Pugh; Stephen Sherry; Patrick F Sullivan; John F Thompson; James Warram; David Wholley; Patrice M Milos; Francis S Collins
Journal:  Nat Genet       Date:  2007-09       Impact factor: 38.330

7.  Data's shameful neglect.

Authors: 
Journal:  Nature       Date:  2009-09-10       Impact factor: 49.962

8.  Selective reporting biases in cancer prognostic factor studies.

Authors:  Panayiotis A Kyzas; Konstantinos T Loizou; John P A Ioannidis
Journal:  J Natl Cancer Inst       Date:  2005-07-20       Impact factor: 13.506

9.  Author Name Disambiguation in MEDLINE.

Authors:  Vetle I Torvik; Neil R Smalheiser
Journal:  ACM Trans Knowl Discov Data       Date:  2009-07-01       Impact factor: 2.713

10.  Data sharing: how much doesn't get submitted to GenBank?

Authors:  Mohamed A F Noor; Katherine J Zimmerman; Katherine C Teeter
Journal:  PLoS Biol       Date:  2006-07-11       Impact factor: 8.029

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  18 in total

1.  Sharing clinical research data in the United States under the Health Insurance Portability and Accountability Act and the Privacy Rule.

Authors:  James D Miller
Journal:  Trials       Date:  2010-11-19       Impact factor: 2.279

2.  Oh, Behave!: PRESIDENTIAL ADDRESS, XXth International Conference on Infant Studies New Orleans, LA, US May 2016.

Authors:  Karen E Adolph
Journal:  Infancy       Date:  2020-06-18

3.  Who shares? Who doesn't? Factors associated with openly archiving raw research data.

Authors:  Heather A Piwowar
Journal:  PLoS One       Date:  2011-07-13       Impact factor: 3.240

4.  Indicators for the Data Usage Index (DUI): an incentive for publishing primary biodiversity data through global information infrastructure.

Authors:  Peter Ingwersen; Vishwas Chavan
Journal:  BMC Bioinformatics       Date:  2011       Impact factor: 3.169

5.  Extraction of data deposition statements from the literature: a method for automatically tracking research results.

Authors:  Aurélie Névéol; W John Wilbur; Zhiyong Lu
Journal:  Bioinformatics       Date:  2011-10-13       Impact factor: 6.937

6.  DICOM Image ANalysis and Archive (DIANA): an Open-Source System for Clinical AI Applications.

Authors:  Thomas Yi; Ian Pan; Scott Collins; Fiona Chen; Robert Cueto; Ben Hsieh; Celina Hsieh; Jessica L Smith; Li Yang; Wei-Hua Liao; Lisa H Merck; Harrison Bai; Derek Merck
Journal:  J Digit Imaging       Date:  2021-11-02       Impact factor: 4.903

7.  To Share or Not to Share? A Survey of Biomedical Researchers in the U.S. Southwest, an Ethnically Diverse Region.

Authors:  Mai H Oushy; Rebecca Palacios; Alan E C Holden; Amelie G Ramirez; Kipling J Gallion; Mary A O'Connell
Journal:  PLoS One       Date:  2015-09-17       Impact factor: 3.240

8.  What drives academic data sharing?

Authors:  Benedikt Fecher; Sascha Friesike; Marcel Hebing
Journal:  PLoS One       Date:  2015-02-25       Impact factor: 3.240

9.  Public Data Archiving in Ecology and Evolution: How Well Are We Doing?

Authors:  Dominique G Roche; Loeske E B Kruuk; Robert Lanfear; Sandra A Binning
Journal:  PLoS Biol       Date:  2015-11-10       Impact factor: 8.029

10.  Research data explored: an extended analysis of citations and altmetrics.

Authors:  Isabella Peters; Peter Kraker; Elisabeth Lex; Christian Gumpenberger; Juan Gorraiz
Journal:  Scientometrics       Date:  2016-02-15       Impact factor: 3.238

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