Literature DB >> 21336827

Full backbone assignment and dynamics of the intrinsically disordered dehydrin ERD14.

Bianka Szalainé Ágoston1, Dénes Kovács, Péter Tompa, András Perczel.   

Abstract

Dehydrins are a class of stress proteins that belong to the family of Late Embryogenesis Abundant (LEA) proteins in plants, so named because they are highly expressed in late stages of seed formation. In somatic cells, their expression is very low under normal conditions, but increases critically upon dehydration elicited by water stress, high salinity or cold. Dehydrins are thought to be intrinsically disordered proteins, which represents a challenge in understanding their structure-function relationship. Herein we present the backbone (1)H, (15)N and (13)C NMR assignment of the 185 amino acid long ERD14 (Early Response to Dehydration 14), which is a K(3)S-type, typical dehydrin of A. thaliana. Secondary chemical shifts as well as NMR relaxation data show that ERD14 is fully disordered under near native conditions, with short regions of somewhat restricted motion and 5-25% helical propensity. These results suggest that ERD14 may have partially preformed elements for functional interaction with its partner(s) and set the stage for further detailed structural and functional studies of ERD14 both in vitro and in vivo.

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Year:  2011        PMID: 21336827     DOI: 10.1007/s12104-011-9297-2

Source DB:  PubMed          Journal:  Biomol NMR Assign        ISSN: 1874-270X            Impact factor:   0.746


  16 in total

1.  HN-NCA heteronuclear TOCSY-NH experiment for (1)H(N) and (15)N sequential correlations in ((13)C, (15)N) labelled intrinsically disordered proteins.

Authors:  Christoph Wiedemann; Nishit Goradia; Sabine Häfner; Christian Herbst; Matthias Görlach; Oliver Ohlenschläger; Ramadurai Ramachandran
Journal:  J Biomol NMR       Date:  2015-08-18       Impact factor: 2.835

Review 2.  Structural disorder in plant proteins: where plasticity meets sessility.

Authors:  Alejandra A Covarrubias; Cesar L Cuevas-Velazquez; Paulette S Romero-Pérez; David F Rendón-Luna; Caspar C C Chater
Journal:  Cell Mol Life Sci       Date:  2017-06-22       Impact factor: 9.261

3.  Structure of an Intrinsically Disordered Stress Protein Alone and Bound to a Membrane Surface.

Authors:  John Atkinson; Matthew W Clarke; Josephine M Warnica; Kelly F Boddington; Steffen P Graether
Journal:  Biophys J       Date:  2016-08-09       Impact factor: 4.033

Review 4.  The intrinsic disorder alphabet. III. Dual personality of serine.

Authors:  Vladimir N Uversky
Journal:  Intrinsically Disord Proteins       Date:  2015-03-17

5.  Salt stress-induced modulations in the shoot proteome of Brassica juncea genotypes.

Authors:  Peerzada Yasir Yousuf; Altaf Ahmad; Arshid Hussain Ganie; Muhammad Iqbal
Journal:  Environ Sci Pollut Res Int       Date:  2015-09-29       Impact factor: 4.223

Review 6.  Disorder and function: a review of the dehydrin protein family.

Authors:  Steffen P Graether; Kelly F Boddington
Journal:  Front Plant Sci       Date:  2014-10-31       Impact factor: 5.753

7.  Genome Analysis of Conserved Dehydrin Motifs in Vascular Plants.

Authors:  Ahmad A Malik; Michael Veltri; Kelly F Boddington; Karamjeet K Singh; Steffen P Graether
Journal:  Front Plant Sci       Date:  2017-05-04       Impact factor: 5.753

8.  Cellular Chaperone Function of Intrinsically Disordered Dehydrin ERD14.

Authors:  Nikoletta Murvai; Lajos Kalmar; Beata Szabo; Eva Schad; András Micsonai; József Kardos; László Buday; Kyou-Hoon Han; Peter Tompa; Agnes Tantos
Journal:  Int J Mol Sci       Date:  2021-06-08       Impact factor: 5.923

Review 9.  Coping with drought: stress and adaptive responses in potato and perspectives for improvement.

Authors:  Jude E Obidiegwu; Glenn J Bryan; Hamlyn G Jones; Ankush Prashar
Journal:  Front Plant Sci       Date:  2015-07-22       Impact factor: 5.753

10.  Hydrogen skeleton, mobility and protein architecture.

Authors:  Kalman Tompa; Monika Bokor; Kyou-Hoon Han; Peter Tompa
Journal:  Intrinsically Disord Proteins       Date:  2013-04-01
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