Literature DB >> 21335501

Singulisphaera rosea sp. nov., a planctomycete from acidic Sphagnum peat, and emended description of the genus Singulisphaera.

Irina S Kulichevskaya1, Ekaterina N Detkova1, Paul L E Bodelier2, W Irene C Rijpstra3, Jaap S Sinninghe Damsté3, Svetlana N Dedysh1.   

Abstract

An aerobic, pink-pigmented, budding bacterium, designated strain S26(T), was isolated from an acidic Sphagnum peat bog of north-western Russia. Cells were non-motile and spherical, occurring singly, in pairs or in short chains, and were able to attach to surfaces by means of a holdfast material. Strain S26(T) was a moderately acidophilic, mesophilic organism capable of growth at pH 3.2-7.1 (optimum at pH 4.8-5.0) and at 4-33 °C (optimum at 20-26 °C). Most sugars, several organic acids and polyalcohols were the preferred growth substrates. The major fatty acids were C(16:0), C(18:1)ω9c and C(18:2)ω6c,12c. The major neutral lipids were n-C(31:9) hydrocarbon and squalene; the polar lipids were phosphatidylglycerol, phosphatidylcholine and components with an unknown structure. The DNA G+C content of strain S26(T) was 62.2 mol%. 16S rRNA gene sequence analysis showed that strain S26(T) is a member of the order Planctomycetales. Among taxonomically characterized representatives of this order, highest levels of 16S rRNA gene sequence similarity (95.1-95.2%) were observed with strains of the non-filamentous, peat-inhabiting planctomycete Singulisphaera acidiphila. Strain S26(T) could be differentiated from Singulisphaera acidiphila based on pigmentation, significant differences in substrate utilization patterns, greater tolerance of acidic conditions and the presence of C(16:1)ω9c. Based on the data presented, strain S26(T) is considered to represent a novel species of the genus Singulisphaera, for which the name Singulisphaera rosea sp. nov. is proposed; the type strain is S26(T) (=DSM 23044(T)=VKM B-2599(T)).

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Year:  2011        PMID: 21335501     DOI: 10.1099/ijs.0.025924-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  12 in total

1.  Novel mono-, di-, and trimethylornithine membrane lipids in northern wetland planctomycetes.

Authors:  Eli K Moore; Ellen C Hopmans; W Irene C Rijpstra; Laura Villanueva; Svetlana N Dedysh; Irina S Kulichevskaya; Hans Wienk; Frans Schoutsen; Jaap S Sinninghe Damsté
Journal:  Appl Environ Microbiol       Date:  2013-08-30       Impact factor: 4.792

Review 2.  The Planctomycetia: an overview of the currently largest class within the phylum Planctomycetes.

Authors:  Inês Rosado Vitorino; Olga Maria Lage
Journal:  Antonie Van Leeuwenhoek       Date:  2022-01-17       Impact factor: 2.271

3.  Abundant Trimethylornithine Lipids and Specific Gene Sequences Are Indicative of Planctomycete Importance at the Oxic/Anoxic Interface in Sphagnum-Dominated Northern Wetlands.

Authors:  Eli K Moore; Laura Villanueva; Ellen C Hopmans; W Irene C Rijpstra; Anchelique Mets; Svetlana N Dedysh; Jaap S Sinninghe Damsté
Journal:  Appl Environ Microbiol       Date:  2015-07-06       Impact factor: 4.792

4.  Cultivating uncultured bacteria from northern wetlands: knowledge gained and remaining gaps.

Authors:  Svetlana N Dedysh
Journal:  Front Microbiol       Date:  2011-09-16       Impact factor: 5.640

5.  Abundance, diversity, and depth distribution of planctomycetes in acidic northern wetlands.

Authors:  Anastasia O Ivanova; Svetlana N Dedysh
Journal:  Front Microbiol       Date:  2012-01-18       Impact factor: 5.640

6.  Telmatocola sphagniphila gen. nov., sp. nov., a novel dendriform planctomycete from northern wetlands.

Authors:  Irina S Kulichevskaya; Yulia M Serkebaeva; Yongkyu Kim; W Irene C Rijpstra; Jaap S Sinninghe Damsté; Werner Liesack; Svetlana N Dedysh
Journal:  Front Microbiol       Date:  2012-04-17       Impact factor: 5.640

7.  Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305(T)), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended descriptions of the order Planctomycetales and the family Planctomycetaceae.

Authors:  Carmen Scheuner; Brian J Tindall; Megan Lu; Matt Nolan; Alla Lapidus; Jan-Fang Cheng; Lynne Goodwin; Sam Pitluck; Marcel Huntemann; Konstantinos Liolios; Ioanna Pagani; Konstantinos Mavromatis; Natalia Ivanova; Amrita Pati; Amy Chen; Krishna Palaniappan; Cynthia D Jeffries; Loren Hauser; Miriam Land; Romano Mwirichia; Manfred Rohde; Birte Abt; John C Detter; Tanja Woyke; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Markus Göker; Nikos C Kyrpides; Hans-Peter Klenk
Journal:  Stand Genomic Sci       Date:  2014-12-08

8.  High Diversity of Planctomycetes in Soils of Two Lichen-Dominated Sub-Arctic Ecosystems of Northwestern Siberia.

Authors:  Anastasia A Ivanova; Irina S Kulichevskaya; Alexander Y Merkel; Stepan V Toshchakov; Svetlana N Dedysh
Journal:  Front Microbiol       Date:  2016-12-22       Impact factor: 5.640

Review 9.  Planctomycetes as Host-Associated Bacteria: A Perspective That Holds Promise for Their Future Isolations, by Mimicking Their Native Environmental Niches in Clinical Microbiology Laboratories.

Authors:  Odilon D Kaboré; Sylvain Godreuil; Michel Drancourt
Journal:  Front Cell Infect Microbiol       Date:  2020-11-30       Impact factor: 5.293

10.  Bringing Planctomycetes into pure culture.

Authors:  Olga M Lage; Joana Bondoso
Journal:  Front Microbiol       Date:  2012-12-03       Impact factor: 5.640

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