Literature DB >> 21327102

D4Z4 as a prototype of CTCF and lamins-dependent insulator in human cells.

Alexandre Ottaviani1, Caroline Schluth-Bolard, Eric Gilson, Frédérique Magdinier.   

Abstract

Using cellular models that mimic the organizations of the subtelomeric 4q35 locus found in patients affected with Facio-Scapulo-Humeral Dystrophy (FSHD) and in healthy individuals, we recently investigated the biological function of the D4Z4 macrosatellite in this subtelomeric context.We demonstrated that D4Z4 acts as a CTCF and A-type lamins dependent insulator element exhibiting both enhancer- blocking and barrier activities, and displaces a telomere towards the nuclear periphery. This peripheral positioning activity lies within a short sequence that interacts with CTCF and A-type lamins. Depletion in either of these two proteins suppresses these perinuclear activities, revealing the existence of a subtelomeric sequence that is sufficient to position an adjacent telomere to the nuclear periphery. We discuss here the biological implications of these results in the light of our current knowledge in related fields and the potential implication of other CTCF and A-type lamins insulators in the light of human pathologies.

Entities:  

Keywords:  A-type lamins; CTCF; D4Z4; FSHD; insulator; nuclear organization; position effect variegation; subtelomere; telomere

Mesh:

Substances:

Year:  2010        PMID: 21327102      PMCID: PMC3035130          DOI: 10.4161/nucl.1.1.10799

Source DB:  PubMed          Journal:  Nucleus        ISSN: 1949-1034            Impact factor:   4.197


  53 in total

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Authors:  A C Bell; G Felsenfeld
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Journal:  Genes Dev       Date:  2008-12-15       Impact factor: 11.361

4.  Novel roles for A-type lamins in telomere biology and the DNA damage response pathway.

Authors:  Ignacio Gonzalez-Suarez; Abena B Redwood; Stephanie M Perkins; Bart Vermolen; Daniel Lichtensztejin; David A Grotsky; Lucia Morgado-Palacin; Eric J Gapud; Barry P Sleckman; Teresa Sullivan; Julien Sage; Colin L Stewart; Sabine Mai; Susana Gonzalo
Journal:  EMBO J       Date:  2009-07-23       Impact factor: 11.598

Review 5.  CTCF: master weaver of the genome.

Authors:  Jennifer E Phillips; Victor G Corces
Journal:  Cell       Date:  2009-06-26       Impact factor: 41.582

6.  Identification of a perinuclear positioning element in human subtelomeres that requires A-type lamins and CTCF.

Authors:  Alexandre Ottaviani; Caroline Schluth-Bolard; Sylvie Rival-Gervier; Amina Boussouar; Delphine Rondier; Andrea M Foerster; Julia Morere; Serge Bauwens; Sophie Gazzo; Evelyne Callet-Bauchu; Eric Gilson; Frédérique Magdinier
Journal:  EMBO J       Date:  2009-07-30       Impact factor: 11.598

7.  Specific loss of histone H3 lysine 9 trimethylation and HP1gamma/cohesin binding at D4Z4 repeats is associated with facioscapulohumeral dystrophy (FSHD).

Authors:  Weihua Zeng; Jessica C de Greef; Yen-Yun Chen; Richard Chien; Xiangduo Kong; Heather C Gregson; Sara T Winokur; April Pyle; Keith D Robertson; John A Schmiesing; Virginia E Kimonis; Judit Balog; Rune R Frants; Alexander R Ball; Leslie F Lock; Peter J Donovan; Silvère M van der Maarel; Kyoko Yokomori
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8.  Structure, subnuclear distribution, and nuclear matrix association of the mammalian telomeric complex.

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9.  The D4Z4 macrosatellite repeat acts as a CTCF and A-type lamins-dependent insulator in facio-scapulo-humeral dystrophy.

Authors:  Alexandre Ottaviani; Sylvie Rival-Gervier; Amina Boussouar; Andrea M Foerster; Delphine Rondier; Sabrina Sacconi; Claude Desnuelle; Eric Gilson; Frédérique Magdinier
Journal:  PLoS Genet       Date:  2009-02-27       Impact factor: 5.917

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Journal:  Nat Genet       Date:  2008-10-05       Impact factor: 38.330

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  19 in total

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Journal:  Mol Ther       Date:  2013-08       Impact factor: 11.454

2.  A role for CTCF and cohesin in subtelomere chromatin organization, TERRA transcription, and telomere end protection.

Authors:  Zhong Deng; Zhuo Wang; Nick Stong; Robert Plasschaert; Aliah Moczan; Horng-Shen Chen; Sufeng Hu; Priyankara Wikramasinghe; Ramana V Davuluri; Marisa S Bartolomei; Harold Riethman; Paul M Lieberman
Journal:  EMBO J       Date:  2012-09-25       Impact factor: 11.598

Review 3.  Facioscapulohumeral muscular dystrophy (FSHD): an enigma unravelled?

Authors:  Mark Richards; Frédérique Coppée; Nick Thomas; Alexandra Belayew; Meena Upadhyaya
Journal:  Hum Genet       Date:  2011-10-09       Impact factor: 4.132

Review 4.  Disruption of long-range gene regulation in human genetic disease: a kaleidoscope of general principles, diverse mechanisms and unique phenotypic consequences.

Authors:  Shipra Bhatia; Dirk A Kleinjan
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5.  Genomic landscape of CpG rich elements in human.

Authors:  Vladimir N Babenko; Irina V Chadaeva; Yuriy L Orlov
Journal:  BMC Evol Biol       Date:  2017-02-07       Impact factor: 3.260

Review 6.  The nuclear envelope environment and its cancer connections.

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Journal:  Nat Rev Cancer       Date:  2012-02-16       Impact factor: 60.716

7.  Individual epigenetic status of the pathogenic D4Z4 macrosatellite correlates with disease in facioscapulohumeral muscular dystrophy.

Authors:  Takako I Jones; Oliver D King; Charis L Himeda; Sachiko Homma; Jennifer C J Chen; Mary Lou Beermann; Chi Yan; Charles P Emerson; Jeffrey B Miller; Kathryn R Wagner; Peter L Jones
Journal:  Clin Epigenetics       Date:  2015-03-29       Impact factor: 6.551

8.  Subtelomeric CTCF and cohesin binding site organization using improved subtelomere assemblies and a novel annotation pipeline.

Authors:  Nicholas Stong; Zhong Deng; Ravi Gupta; Sufen Hu; Shiela Paul; Amber K Weiner; Evan E Eichler; Tina Graves; Catrina C Fronick; Laura Courtney; Richard K Wilson; Paul M Lieberman; Ramana V Davuluri; Harold Riethman
Journal:  Genome Res       Date:  2014-03-27       Impact factor: 9.043

9.  Telomere position effect regulates DUX4 in human facioscapulohumeral muscular dystrophy.

Authors:  Guido Stadler; Fedik Rahimov; Oliver D King; Jennifer C J Chen; Jerome D Robin; Kathryn R Wagner; Jerry W Shay; Charles P Emerson; Woodring E Wright
Journal:  Nat Struct Mol Biol       Date:  2013-05-05       Impact factor: 15.369

10.  DUX4 expression in FSHD muscle cells: how could such a rare protein cause a myopathy?

Authors:  Alexandra Tassin; Dalila Laoudj-Chenivesse; Céline Vanderplanck; Marietta Barro; Sébastien Charron; Eugénie Ansseau; Yi-Wen Chen; Jacques Mercier; Frédérique Coppée; Alexandra Belayew
Journal:  J Cell Mol Med       Date:  2012-12-04       Impact factor: 5.310

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