Literature DB >> 21326889

ZBED6: The birth of a new transcription factor in the common ancestor of placental mammals.

Leif Andersson1, Göran Andersson, Göran Hjälm, Lin Jiang, Kerstin Lindblad-Toh, Anders M Lindroth, Ellen Markljung, Anna-Maja Nyström, Carl-Johan Rubin, Elisabeth Sundström.   

Abstract

A DNA transposon integrated into -the genome of a primitive mammal some 200 million years ago and, millions of years later, it evolved an essential function in the common ancestor of all placental mammals. This protein, now named ZBED6, was recently discovered because a mutation disrupting one of its binding sites, in an intron of the IGF2 gene, makes pigs grow more muscle. These findings have revealed a new mechanism for regulating muscle growth as well as a novel transcription factor that appears to be of major importance for transcriptional regulation in placental mammals.

Entities:  

Year:  2010        PMID: 21326889      PMCID: PMC3023575          DOI: 10.4161/trns.1.3.13343

Source DB:  PubMed          Journal:  Transcription        ISSN: 2154-1272


  29 in total

Review 1.  Evolution at two levels in humans and chimpanzees.

Authors:  M C King; A C Wilson
Journal:  Science       Date:  1975-04-11       Impact factor: 47.728

2.  Contrasts between adaptive coding and noncoding changes during human evolution.

Authors:  Ralph Haygood; Courtney C Babbitt; Olivier Fedrigo; Gregory A Wray
Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-12       Impact factor: 11.205

3.  An imprinted QTL with major effect on muscle mass and fat deposition maps to the IGF2 locus in pigs.

Authors:  C Nezer; L Moreau; B Brouwers; W Coppieters; J Detilleux; R Hanset; L Karim; A Kvasz; P Leroy; M Georges
Journal:  Nat Genet       Date:  1999-02       Impact factor: 38.330

4.  Transcriptional corepressor TLE1 functions with Runx2 in epigenetic repression of ribosomal RNA genes.

Authors:  Syed A Ali; Sayyed K Zaidi; Jason R Dobson; Abdul R Shakoori; Jane B Lian; Janet L Stein; Andre J van Wijnen; Gary S Stein
Journal:  Proc Natl Acad Sci U S A       Date:  2010-02-16       Impact factor: 11.205

5.  Evidence for a common evolutionary origin of inverted repeat transposons in Drosophila and plants: hobo, Activator, and Tam3.

Authors:  B R Calvi; T J Hong; S D Findley; W M Gelbart
Journal:  Cell       Date:  1991-08-09       Impact factor: 41.582

6.  Selection in the making: a worldwide survey of haplotypic diversity around a causative mutation in porcine IGF2.

Authors:  A Ojeda; L-S Huang; J Ren; A Angiolillo; I-C Cho; H Soto; C Lemús-Flores; S M Makuza; J M Folch; M Pérez-Enciso
Journal:  Genetics       Date:  2008-02-03       Impact factor: 4.562

7.  Integration of external signaling pathways with the core transcriptional network in embryonic stem cells.

Authors:  Xi Chen; Han Xu; Ping Yuan; Fang Fang; Mikael Huss; Vinsensius B Vega; Eleanor Wong; Yuriy L Orlov; Weiwei Zhang; Jianming Jiang; Yuin-Han Loh; Hock Chuan Yeo; Zhen Xuan Yeo; Vipin Narang; Kunde Ramamoorthy Govindarajan; Bernard Leong; Atif Shahab; Yijun Ruan; Guillaume Bourque; Wing-Kin Sung; Neil D Clarke; Chia-Lin Wei; Huck-Hui Ng
Journal:  Cell       Date:  2008-06-13       Impact factor: 41.582

8.  ZBED6, a novel transcription factor derived from a domesticated DNA transposon regulates IGF2 expression and muscle growth.

Authors:  Ellen Markljung; Lin Jiang; Jacob D Jaffe; Tarjei S Mikkelsen; Ola Wallerman; Martin Larhammar; Xiaolan Zhang; Li Wang; Veronica Saenz-Vash; Andreas Gnirke; Anders M Lindroth; Romain Barrés; Jie Yan; Sara Strömberg; Sachinandan De; Fredrik Pontén; Eric S Lander; Steven A Carr; Juleen R Zierath; Klas Kullander; Claes Wadelius; Kerstin Lindblad-Toh; Göran Andersson; Göran Hjälm; Leif Andersson
Journal:  PLoS Biol       Date:  2009-12-15       Impact factor: 8.029

9.  Tissue-specific transcriptional regulation has diverged significantly between human and mouse.

Authors:  Duncan T Odom; Robin D Dowell; Elizabeth S Jacobsen; William Gordon; Timothy W Danford; Kenzie D MacIsaac; P Alexander Rolfe; Caitlin M Conboy; David K Gifford; Ernest Fraenkel
Journal:  Nat Genet       Date:  2007-05-21       Impact factor: 38.330

10.  Genome analysis of the platypus reveals unique signatures of evolution.

Authors:  Wesley C Warren; LaDeana W Hillier; Jennifer A Marshall Graves; Ewan Birney; Chris P Ponting; Frank Grützner; Katherine Belov; Webb Miller; Laura Clarke; Asif T Chinwalla; Shiaw-Pyng Yang; Andreas Heger; Devin P Locke; Pat Miethke; Paul D Waters; Frédéric Veyrunes; Lucinda Fulton; Bob Fulton; Tina Graves; John Wallis; Xose S Puente; Carlos López-Otín; Gonzalo R Ordóñez; Evan E Eichler; Lin Chen; Ze Cheng; Janine E Deakin; Amber Alsop; Katherine Thompson; Patrick Kirby; Anthony T Papenfuss; Matthew J Wakefield; Tsviya Olender; Doron Lancet; Gavin A Huttley; Arian F A Smit; Andrew Pask; Peter Temple-Smith; Mark A Batzer; Jerilyn A Walker; Miriam K Konkel; Robert S Harris; Camilla M Whittington; Emily S W Wong; Neil J Gemmell; Emmanuel Buschiazzo; Iris M Vargas Jentzsch; Angelika Merkel; Juergen Schmitz; Anja Zemann; Gennady Churakov; Jan Ole Kriegs; Juergen Brosius; Elizabeth P Murchison; Ravi Sachidanandam; Carly Smith; Gregory J Hannon; Enkhjargal Tsend-Ayush; Daniel McMillan; Rosalind Attenborough; Willem Rens; Malcolm Ferguson-Smith; Christophe M Lefèvre; Julie A Sharp; Kevin R Nicholas; David A Ray; Michael Kube; Richard Reinhardt; Thomas H Pringle; James Taylor; Russell C Jones; Brett Nixon; Jean-Louis Dacheux; Hitoshi Niwa; Yoko Sekita; Xiaoqiu Huang; Alexander Stark; Pouya Kheradpour; Manolis Kellis; Paul Flicek; Yuan Chen; Caleb Webber; Ross Hardison; Joanne Nelson; Kym Hallsworth-Pepin; Kim Delehaunty; Chris Markovic; Pat Minx; Yucheng Feng; Colin Kremitzki; Makedonka Mitreva; Jarret Glasscock; Todd Wylie; Patricia Wohldmann; Prathapan Thiru; Michael N Nhan; Craig S Pohl; Scott M Smith; Shunfeng Hou; Mikhail Nefedov; Pieter J de Jong; Marilyn B Renfree; Elaine R Mardis; Richard K Wilson
Journal:  Nature       Date:  2008-05-08       Impact factor: 49.962

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  8 in total

1.  Free fatty acid receptor 4 deletion attenuates colitis by modulating Treg Cells via ZBED6-IL33 pathway.

Authors:  Shenglong Zhu; Jingwei Zhang; Xuan Jiang; Wei Wang; Yong Q Chen
Journal:  EBioMedicine       Date:  2022-05-16       Impact factor: 11.205

2.  Knockdown of ZBED6 is not associated with changes in murine preadipocyte proliferation or differentiation.

Authors:  Wei Zhang; Mark A Cline; Dongmin Liu; Elizabeth R Gilbert
Journal:  Adipocyte       Date:  2013-08-13       Impact factor: 4.534

3.  ZBED6 modulates the transcription of myogenic genes in mouse myoblast cells.

Authors:  Lin Jiang; Ola Wallerman; Shady Younis; Carl-Johan Rubin; Elizabeth R Gilbert; Elisabeth Sundström; Awaisa Ghazal; Xiaolan Zhang; Li Wang; Tarjei S Mikkelsen; Göran Andersson; Leif Andersson
Journal:  PLoS One       Date:  2014-04-08       Impact factor: 3.240

4.  Knock-down of ZBED6 in insulin-producing cells promotes N-cadherin junctions between beta-cells and neural crest stem cells in vitro.

Authors:  Xuan Wang; Beichen Xie; Yu Qi; Ola Wallerman; Svitlana Vasylovska; Leif Andersson; Elena Nickolaevna Kozlova; Nils Welsh
Journal:  Sci Rep       Date:  2016-01-11       Impact factor: 4.379

Review 5.  Domestic animals as models for biomedical research.

Authors:  Leif Andersson
Journal:  Ups J Med Sci       Date:  2015-10-19       Impact factor: 2.384

6.  Efficient Editing of the ZBED6-Binding Site in Intron 3 of IGF2 in a Bovine Model Using the CRISPR/Cas9 System.

Authors:  Huiying Zou; Dawei Yu; Shun Yao; Fangrong Ding; Junliang Li; Ling Li; Xue Li; Shanjiang Zhao; Yunwei Pang; Haisheng Hao; Weihua Du; Xueming Zhao; Yunping Dai; Huabin Zhu
Journal:  Genes (Basel)       Date:  2022-06-24       Impact factor: 4.141

7.  Transcription factor ZBED6 mediates IGF2 gene expression by regulating promoter activity and DNA methylation in myoblasts.

Authors:  Yong-Zhen Huang; Liang-Zhi Zhang; Xin-Sheng Lai; Ming-Xun Li; Yu-Jia Sun; Cong-Jun Li; Xian-Yong Lan; Chu-Zhao Lei; Chun-Lei Zhang; Xin Zhao; Hong Chen
Journal:  Sci Rep       Date:  2014-04-02       Impact factor: 4.379

8.  A 5'-regulatory region and two coding region polymorphisms modulate promoter activity and gene expression of the growth suppressor gene ZBED6 in cattle.

Authors:  Yong-Zhen Huang; Ming-Xun Li; Jing Wang; Zhao-Yang Zhan; Yu-Jia Sun; Jia-Jie Sun; Cong-Jun Li; Xian-Yong Lan; Chu-Zhao Lei; Chun-Lei Zhang; Hong Chen
Journal:  PLoS One       Date:  2013-11-06       Impact factor: 3.240

  8 in total

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