Literature DB >> 21325893

Comparative transcriptional pathway bioinformatic analysis of dietary restriction, Sir2, p53 and resveratrol life span extension in Drosophila.

Michael Antosh1, Rachel Whitaker, Adam Kroll, Suzanne Hosier, Chengyi Chang, Johannes Bauer, Leon Cooper, Nicola Neretti, Stephen L Helfand.   

Abstract

A multiple comparison approach using whole genome transcriptional arrays was used to identify genes and pathways involved in calorie restriction/dietary restriction (DR) life span extension in Drosophila. Starting with a gene centric analysis comparing the changes in common between DR and two DR related molecular genetic life span extending manipulations, Sir2 and p53, lead to a molecular confirmation of Sir2 and p53's similarity with DR and the identification of a small set of commonly regulated genes. One of the identified upregulated genes, takeout, known to be involved in feeding and starvation behavior, and to have sequence homology with Juvenile Hormone (JH) binding protein, was shown to directly extend life span when specifically overexpressed. Here we show that a pathway centric approach can be used to identify shared physiological pathways between DR and Sir2, p53 and resveratrol life span extending interventions. The set of physiological pathways in common among these life span extending interventions provides an initial step toward defining molecular genetic and physiological changes important in life span extension. The large overlap in shared pathways between DR, Sir2, p53 and resveratrol provide strong molecular evidence supporting the genetic studies linking these specific life span extending interventions.

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Year:  2011        PMID: 21325893      PMCID: PMC3100872          DOI: 10.4161/cc.10.6.14912

Source DB:  PubMed          Journal:  Cell Cycle        ISSN: 1551-4005            Impact factor:   4.534


  36 in total

1.  KEGG: kyoto encyclopedia of genes and genomes.

Authors:  M Kanehisa; S Goto
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

2.  Longevity regulation by Drosophila Rpd3 deacetylase and caloric restriction.

Authors:  Blanka Rogina; Stephen L Helfand; Stewart Frankel
Journal:  Science       Date:  2002-11-29       Impact factor: 47.728

Review 3.  Hormonal pleiotropy and the juvenile hormone regulation of Drosophila development and life history.

Authors:  Thomas Flatt; Meng-Ping Tu; Marc Tatar
Journal:  Bioessays       Date:  2005-10       Impact factor: 4.345

4.  Resveratrol delays age-related deterioration and mimics transcriptional aspects of dietary restriction without extending life span.

Authors:  Kevin J Pearson; Joseph A Baur; Kaitlyn N Lewis; Leonid Peshkin; Nathan L Price; Nazar Labinskyy; William R Swindell; Davida Kamara; Robin K Minor; Evelyn Perez; Hamish A Jamieson; Yongqing Zhang; Stephen R Dunn; Kumar Sharma; Nancy Pleshko; Laura A Woollett; Anna Csiszar; Yuji Ikeno; David Le Couteur; Peter J Elliott; Kevin G Becker; Placido Navas; Donald K Ingram; Norman S Wolf; Zoltan Ungvari; David A Sinclair; Rafael de Cabo
Journal:  Cell Metab       Date:  2008-07-03       Impact factor: 27.287

5.  Group testing for pathway analysis improves comparability of different microarray datasets.

Authors:  Theodora Manoli; Norbert Gretz; Hermann-Josef Gröne; Marc Kenzelmann; Roland Eils; Benedikt Brors
Journal:  Bioinformatics       Date:  2006-08-07       Impact factor: 6.937

6.  Juvenile hormone regulation of longevity in the migratory monarch butterfly.

Authors:  W S Herman; M Tatar
Journal:  Proc Biol Sci       Date:  2001-12-22       Impact factor: 5.349

Review 7.  Slow aging during insect reproductive diapause: why butterflies, grasshoppers and flies are like worms.

Authors:  M Tatar; C Yin
Journal:  Exp Gerontol       Date:  2001-04       Impact factor: 4.032

8.  Dietary restriction and other lifespan extending pathways converge at the activation of the downstream effector takeout.

Authors:  Martina Gáliková; Thomas Flatt
Journal:  Aging (Albany NY)       Date:  2010-07       Impact factor: 5.682

9.  GSEA-P: a desktop application for Gene Set Enrichment Analysis.

Authors:  Aravind Subramanian; Heidi Kuehn; Joshua Gould; Pablo Tamayo; Jill P Mesirov
Journal:  Bioinformatics       Date:  2007-07-20       Impact factor: 6.937

10.  dSir2 and Dmp53 interact to mediate aspects of CR-dependent lifespan extension in D. melanogaster.

Authors:  Johannes H Bauer; Siti Nur Sarah Morris; Chengyi Chang; Thomas Flatt; Jason G Wood; Stephen L Helfand
Journal:  Aging (Albany NY)       Date:  2009-01       Impact factor: 5.682

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  16 in total

1.  MicroRNA-203 regulates caveolin-1 in breast tissue during caloric restriction.

Authors:  Ulf Andersson Ørom; Meng K Lim; Jason E Savage; Lianjin Jin; Anthony D Saleh; Michael P Lisanti; Nicole L Simone
Journal:  Cell Cycle       Date:  2012-04-01       Impact factor: 4.534

2.  A Periodic Diet that Mimics Fasting Promotes Multi-System Regeneration, Enhanced Cognitive Performance, and Healthspan.

Authors:  Sebastian Brandhorst; In Young Choi; Min Wei; Chia Wei Cheng; Sargis Sedrakyan; Gerardo Navarrete; Louis Dubeau; Li Peng Yap; Ryan Park; Manlio Vinciguerra; Stefano Di Biase; Hamed Mirzaei; Mario G Mirisola; Patra Childress; Lingyun Ji; Susan Groshen; Fabio Penna; Patrizio Odetti; Laura Perin; Peter S Conti; Yuji Ikeno; Brian K Kennedy; Pinchas Cohen; Todd E Morgan; Tanya B Dorff; Valter D Longo
Journal:  Cell Metab       Date:  2015-06-18       Impact factor: 27.287

3.  Time-restricted feeding attenuates age-related cardiac decline in Drosophila.

Authors:  Shubhroz Gill; Hiep D Le; Girish C Melkani; Satchidananda Panda
Journal:  Science       Date:  2015-03-13       Impact factor: 47.728

4.  Adenosine nucleotide biosynthesis and AMPK regulate adult life span and mediate the longevity benefit of caloric restriction in flies.

Authors:  Drew Stenesen; Jae Myoung Suh; Jin Seo; Kweon Yu; Kyu-Sun Lee; Jong-Seok Kim; Kyung-Jin Min; Jonathan M Graff
Journal:  Cell Metab       Date:  2013-01-08       Impact factor: 27.287

5.  takeout-dependent longevity is associated with altered Juvenile Hormone signaling.

Authors:  Khalil H Chamseddin; Sabina Q Khan; Mai L H Nguyen; Michael Antosh; Siti Nur Sarah Morris; Santharam Kolli; Nicola Neretti; Stephen L Helfand; Johannes H Bauer
Journal:  Mech Ageing Dev       Date:  2012-08-30       Impact factor: 5.432

6.  A healthier approach to clinical trials evaluating resveratrol for primary prevention of age‐related diseases in healthy populations.

Authors:  James M Smoliga; E Sage Colombo; Matthew J Campen
Journal:  Aging (Albany NY)       Date:  2013-07       Impact factor: 5.682

Review 7.  Caloric restriction: is mammalian life extension linked to p53?

Authors:  Paola Tucci
Journal:  Aging (Albany NY)       Date:  2012-08       Impact factor: 5.682

8.  The Yang-Tonifying Herbal Medicine Cynomorium songaricum Extends Lifespan and Delays Aging in Drosophila.

Authors:  Hsin-Ping Liu; Rong-Fu Chang; Yih-Shyuan Wu; Wei-Yong Lin; Fuu-Jen Tsai
Journal:  Evid Based Complement Alternat Med       Date:  2012-07-15       Impact factor: 2.629

Review 9.  Recent progress in genetics of aging, senescence and longevity: focusing on cancer-related genes.

Authors:  Albert E Berman; Olga V Leontieva; Venkatesh Natarajan; James A McCubrey; Zoya N Demidenko; Mikhail A Nikiforov
Journal:  Oncotarget       Date:  2012-12

10.  Overexpression of Sir2 in the adult fat body is sufficient to extend lifespan of male and female Drosophila.

Authors:  Julia Hoffmann; Renja Romey; Christine Fink; Li Yong; Thomas Roeder
Journal:  Aging (Albany NY)       Date:  2013-04       Impact factor: 5.682

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