Literature DB >> 21317359

Development of an artificial cell, from self-organization to computation and self-reproduction.

Vincent Noireaux1, Yusuke T Maeda, Albert Libchaber.   

Abstract

This article describes the state and the development of an artificial cell project. We discuss the experimental constraints to synthesize the most elementary cell-sized compartment that can self-reproduce using synthetic genetic information. The original idea was to program a phospholipid vesicle with DNA. Based on this idea, it was shown that in vitro gene expression could be carried out inside cell-sized synthetic vesicles. It was also shown that a couple of genes could be expressed for a few days inside the vesicles once the exchanges of nutrients with the outside environment were adequately introduced. The development of a cell-free transcription/translation toolbox allows the expression of a large number of genes with multiple transcription factors. As a result, the development of a synthetic DNA program is becoming one of the main hurdles. We discuss the various possibilities to enrich and to replicate this program. Defining a program for self-reproduction remains a difficult question as nongenetic processes, such as molecular self-organization, play an essential and complementary role. The synthesis of a stable compartment with an active interface, one of the critical bottlenecks in the synthesis of artificial cell, depends on the properties of phospholipid membranes. The problem of a self-replicating artificial cell is a long-lasting goal that might imply evolution experiments.

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Year:  2011        PMID: 21317359      PMCID: PMC3048108          DOI: 10.1073/pnas.1017075108

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  79 in total

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Journal:  Phys Rev Lett       Date:  1996-05-20       Impact factor: 9.161

2.  Imaging coexisting fluid domains in biomembrane models coupling curvature and line tension.

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Journal:  Nature       Date:  2003-10-23       Impact factor: 49.962

3.  Exponential DNA replication by laminar convection.

Authors:  Dieter Braun; Noel L Goddard; Albert Libchaber
Journal:  Phys Rev Lett       Date:  2003-10-09       Impact factor: 9.161

4.  Spontaneous protein crowding in liposomes: a new vista for the origin of cellular metabolism.

Authors:  Pier Luigi Luisi; Matteo Allegretti; Tereza Pereira de Souza; Frank Steiniger; Alfred Fahr; Pasquale Stano
Journal:  Chembiochem       Date:  2010-09-24       Impact factor: 3.164

5.  Average gene length is highly conserved in prokaryotes and eukaryotes and diverges only between the two kingdoms.

Authors:  Lin Xu; Hong Chen; Xiaohua Hu; Rongmei Zhang; Ze Zhang; Z W Luo
Journal:  Mol Biol Evol       Date:  2006-04-12       Impact factor: 16.240

Review 6.  Synthetic biology projects in vitro.

Authors:  Anthony C Forster; George M Church
Journal:  Genome Res       Date:  2006-12-06       Impact factor: 9.043

Review 7.  Evolution and self-assembly of protocells.

Authors:  Ricard V Solé
Journal:  Int J Biochem Cell Biol       Date:  2008-10-17       Impact factor: 5.085

8.  Bacteriophage T7 DNA replication in vitro. Stimulation of DNA synthesis by T7 RNA polymerase.

Authors:  H Fischer; D C Hinkle
Journal:  J Biol Chem       Date:  1980-08-25       Impact factor: 5.157

9.  Species-independent translational leaders facilitate cell-free expression.

Authors:  Sergei Mureev; Oleksiy Kovtun; Uyen T T Nguyen; Kirill Alexandrov
Journal:  Nat Biotechnol       Date:  2009-08-02       Impact factor: 54.908

10.  A synthetic biology approach to the construction of membrane proteins in semi-synthetic minimal cells.

Authors:  Yutetsu Kuruma; Pasquale Stano; Takuya Ueda; Pier Luigi Luisi
Journal:  Biochim Biophys Acta       Date:  2008-11-05
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  71 in total

1.  Molecular convergence of bacterial and eukaryotic surface order.

Authors:  Hermann-Josef Kaiser; Michal A Surma; Florian Mayer; Ilya Levental; Michal Grzybek; Robin W Klemm; Sandrine Da Cruz; Chris Meisinger; Volker Müller; Kai Simons; Daniel Lingwood
Journal:  J Biol Chem       Date:  2011-09-30       Impact factor: 5.157

2.  Sustainable proliferation of liposomes compatible with inner RNA replication.

Authors:  Gakushi Tsuji; Satoshi Fujii; Takeshi Sunami; Tetsuya Yomo
Journal:  Proc Natl Acad Sci U S A       Date:  2015-12-28       Impact factor: 11.205

3.  Artificial cells: crowded genes perform differently.

Authors:  Friedrich C Simmel
Journal:  Nat Nanotechnol       Date:  2013-08       Impact factor: 39.213

4.  Protocell design through modular compartmentalization.

Authors:  David Miller; Paula J Booth; John M Seddon; Richard H Templer; Robert V Law; Rudiger Woscholski; Oscar Ces; Laura M C Barter
Journal:  J R Soc Interface       Date:  2013-08-07       Impact factor: 4.118

5.  Self-organizing motors divide active liquid droplets.

Authors:  Kimberly L Weirich; Kinjal Dasbiswas; Thomas A Witten; Suriyanarayanan Vaikuntanathan; Margaret L Gardel
Journal:  Proc Natl Acad Sci U S A       Date:  2019-05-21       Impact factor: 11.205

6.  How to Build a Biological Machine Using Engineering Materials and Methods.

Authors:  Alex Ellery
Journal:  Biomimetics (Basel)       Date:  2020-07-26

Review 7.  Macromolecular interactions of the bacterial division FtsZ protein: from quantitative biochemistry and crowding to reconstructing minimal divisomes in the test tube.

Authors:  Germán Rivas; Carlos Alfonso; Mercedes Jiménez; Begoña Monterroso; Silvia Zorrilla
Journal:  Biophys Rev       Date:  2013-04-16

Review 8.  Bacterial intelligence: imitation games, time-sharing, and long-range quantum coherence.

Authors:  Sarangam Majumdar; Sukla Pal
Journal:  J Cell Commun Signal       Date:  2017-05-17       Impact factor: 5.782

Review 9.  Toward the assembly of a minimal divisome.

Authors:  Zohreh Nourian; Andrew Scott; Christophe Danelon
Journal:  Syst Synth Biol       Date:  2014-04-27

Review 10.  Divided we stand: splitting synthetic cells for their proliferation.

Authors:  Yaron Caspi; Cees Dekker
Journal:  Syst Synth Biol       Date:  2014-05-27
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