Literature DB >> 21316463

Symmetric diffeomorphic registration of fibre orientation distributions.

David Raffelt1, J-Donald Tournier, Jurgen Fripp, Stuart Crozier, Alan Connelly, Olivier Salvado.   

Abstract

Registration of diffusion-weighted images is an important step in comparing white matter fibre bundles across subjects, or in the same subject at different time points. Using diffusion-weighted imaging, Spherical Deconvolution enables multiple fibre populations within a voxel to be resolved by computing the fibre orientation distribution (FOD). In this paper, we present a novel method that employs FODs for the registration of diffusion-weighted images. Registration was performed by optimising a symmetric diffeomorphic non-linear transformation model, using image metrics based on the mean squared difference, and cross-correlation of the FOD spherical harmonic coefficients. The proposed method was validated by recovering known displacement fields using FODs represented with maximum harmonic degrees (l(max)) of 2, 4 and 6. Results demonstrate a benefit in using FODs at l(max)=4 compared to l(max)=2. However, a decrease in registration accuracy was observed when l(max)=6 was used; this was likely caused by noise in higher harmonic degrees. We compared our proposed method to fractional anisotropy driven registration using an identical code base and parameters. FOD registration was observed to perform significantly better than FA in all experiments. The cross-correlation metric performed significantly better than the mean squared difference. Finally, we demonstrated the utility of this method by computing an unbiased group average FOD template that was used for probabilistic fibre tractography. This work suggests that using crossing fibre information aids in the alignment of white matter and could therefore benefit several methods for investigating population differences in white matter, including voxel based analysis, tensor based morphometry, atlas based segmentation and labelling, and group average fibre tractography. Crown
Copyright © 2010. Published by Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 21316463     DOI: 10.1016/j.neuroimage.2011.02.014

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  74 in total

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2.  Symplectomorphic registration with phase space regularization by entropy spectrum pathways.

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3.  PopTract: population-based tractography.

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Journal:  IEEE Trans Med Imaging       Date:  2011-05-12       Impact factor: 10.048

4.  Development of a high angular resolution diffusion imaging human brain template.

Authors:  Anna Varentsova; Shengwei Zhang; Konstantinos Arfanakis
Journal:  Neuroimage       Date:  2014-01-15       Impact factor: 6.556

5.  Low Rank plus Sparse decomposition of ODFs for improved detection of group-level differences and variable correlations in white matter.

Authors:  Steven H Baete; Jingyun Chen; Ying-Chia Lin; Xiuyuan Wang; Ricardo Otazo; Fernando E Boada
Journal:  Neuroimage       Date:  2018-03-08       Impact factor: 6.556

6.  Individualized Thalamic Parcellation Reveals Alterations in Shape and Microstructure of Thalamic Nuclei in Patients with Disorder of Consciousness.

Authors:  Weihao Zheng; Xufei Tan; Tingting Liu; Xiaoxia Li; Jian Gao; Lirong Hong; Xiaotong Zhang; Zhiyong Zhao; Yamei Yu; Yi Zhang; Benyan Luo; Dan Wu
Journal:  Cereb Cortex Commun       Date:  2021-04-02

7.  Large deformation diffeomorphic registration of diffusion-weighted images with explicit orientation optimization.

Authors:  Pei Zhang; Marc Niethammer; Dinggang Shen; Pew-Thian Yap
Journal:  Med Image Comput Comput Assist Interv       Date:  2013

8.  Sheet Probability Index (SPI): Characterizing the geometrical organization of the white matter with diffusion MRI.

Authors:  Chantal M W Tax; Tom Dela Haije; Andrea Fuster; Carl-Fredrik Westin; Max A Viergever; Luc Florack; Alexander Leemans
Journal:  Neuroimage       Date:  2016-07-25       Impact factor: 6.556

9.  Large deformation diffeomorphic registration of diffusion-weighted images.

Authors:  Pei Zhang; Marc Niethammer; Dinggang Shen; Pew-Thian Yap
Journal:  Med Image Comput Comput Assist Interv       Date:  2012

10.  Multi-Channel 4D Parametrized Atlas of Macro- and Microstructural Neonatal Brain Development.

Authors:  Alena Uus; Irina Grigorescu; Maximilian Pietsch; Dafnis Batalle; Daan Christiaens; Emer Hughes; Jana Hutter; Lucilio Cordero Grande; Anthony N Price; Jacques-Donald Tournier; Mary A Rutherford; Serena J Counsell; Joseph V Hajnal; A David Edwards; Maria Deprez
Journal:  Front Neurosci       Date:  2021-06-16       Impact factor: 4.677

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