Literature DB >> 21314176

Organization of inorganic nanomaterials via programmable DNA self-assembly and peptide molecular recognition.

Joshua D Carter1, Thomas H LaBean.   

Abstract

An interesting alternative to top-down nanofabrication is to imitate biology, where nanoscale materials frequently integrate organic molecules for self-assembly and molecular recognition with ordered, inorganic minerals to achieve mechanical, sensory, or other advantageous functions. Using biological systems as inspiration, researchers have sought to mimic the nanoscale composite materials produced in nature. Here, we describe a combination of self-assembly, molecular recognition, and templating, relying on an oligonucleotide covalently conjugated to a high-affinity gold-binding peptide. After integration of the peptide-coupled DNA into a self-assembling superstructure, the templated peptides recognize and bind gold nanoparticles. In addition to providing new ways of building functional multinanoparticle systems, this work provides experimental proof that a single peptide molecule is sufficient for immobilization of a nanoparticle. This molecular construction strategy, combining DNA assembly and peptide recognition, can be thought of as programmable, granular, artificial biomineralization. We also describe the important observation that the addition of 1-2% Tween 20 surfactant to the solution during gold particle binding allows the gold nanoparticles to remain soluble within the magnesium-containing DNA assembly buffer under conditions that usually lead to the aggregation and precipitation of the nanoparticles.

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Year:  2011        PMID: 21314176      PMCID: PMC3062703          DOI: 10.1021/nn1033983

Source DB:  PubMed          Journal:  ACS Nano        ISSN: 1936-0851            Impact factor:   15.881


  18 in total

Review 1.  Molecular biomimetics: nanotechnology through biology.

Authors:  Mehmet Sarikaya; Candan Tamerler; Alex K-Y Jen; Klaus Schulten; François Baneyx
Journal:  Nat Mater       Date:  2003-09       Impact factor: 43.841

2.  Gold nanoparticle self-similar chain structure organized by DNA origami.

Authors:  Baoquan Ding; Zhengtao Deng; Hao Yan; Stefano Cabrini; Ronald N Zuckermann; Jeffrey Bokor
Journal:  J Am Chem Soc       Date:  2010-03-17       Impact factor: 15.419

3.  Programmable DNA self-assemblies for nanoscale organization of ligands and proteins.

Authors:  Sung Ha Park; Peng Yin; Yan Liu; John H Reif; Thomas H LaBean; Hao Yan
Journal:  Nano Lett       Date:  2005-04       Impact factor: 11.189

4.  DNA-templated self-assembly of two-dimensional and periodical gold nanoparticle arrays.

Authors:  Jaswinder Sharma; Rahul Chhabra; Yan Liu; Yonggang Ke; Hao Yan
Journal:  Angew Chem Int Ed Engl       Date:  2006-01-23       Impact factor: 15.336

5.  Towards an in vivo biologically inspired nanofactory.

Authors:  Philip R Leduc; Michael S Wong; Placid M Ferreira; Richard E Groff; Kiryn Haslinger; Michael P Koonce; Woo Y Lee; J Christopher Love; J Andrew McCammon; Nancy A Monteiro-Riviere; Vincent M Rotello; Gary W Rubloff; Robert Westervelt; Minami Yoda
Journal:  Nat Nanotechnol       Date:  2007-01       Impact factor: 39.213

6.  Highly efficient resonant coupling of optical excitations in hybrid organic/inorganic semiconductor nanostructures.

Authors:  Qiang Zhang; Tolga Atay; Jonathan R Tischler; M Scott Bradley; Vladimir Bulović; A V Nurmikko
Journal:  Nat Nanotechnol       Date:  2007-08-19       Impact factor: 39.213

7.  Effect of molecular conformations on the adsorption behavior of gold-binding peptides.

Authors:  Marketa Hnilova; Ersin Emre Oren; Urartu O S Seker; Brandon R Wilson; Sebastiano Collino; John S Evans; Candan Tamerler; Mehmet Sarikaya
Journal:  Langmuir       Date:  2008-10-08       Impact factor: 3.882

8.  Template-directed nucleation and growth of inorganic nanoparticles on DNA scaffolds.

Authors:  Linda A Stearns; Rahul Chhabra; Jaswinder Sharma; Yan Liu; William T Petuskey; Hao Yan; John C Chaput
Journal:  Angew Chem Int Ed Engl       Date:  2009       Impact factor: 15.336

9.  A new peptide-based method for the design and synthesis of nanoparticle superstructures: construction of highly ordered gold nanoparticle double helices.

Authors:  Chun-Long Chen; Peijun Zhang; Nathaniel L Rosi
Journal:  J Am Chem Soc       Date:  2008-09-19       Impact factor: 15.419

10.  The AFM measured force required to rupture the dithiolate linkage of thioctic acid to gold is less than the rupture force of a simple gold-alkyl thiolate bond.

Authors:  Kevin C Langry; Timothy V Ratto; Robert E Rudd; Michael W McElfresh
Journal:  Langmuir       Date:  2005-12-20       Impact factor: 3.882

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  13 in total

1.  Nanomanufacturing: A Perspective.

Authors:  J Alexander Liddle; Gregg M Gallatin
Journal:  ACS Nano       Date:  2016-02-22       Impact factor: 15.881

2.  DNA-based programming of quantum dot valency, self-assembly and luminescence.

Authors:  Grigory Tikhomirov; Sjoerd Hoogland; P E Lee; Armin Fischer; Edward H Sargent; Shana O Kelley
Journal:  Nat Nanotechnol       Date:  2011-07-10       Impact factor: 39.213

3.  Nucleic acid-based nanoengineering: novel structures for biomedical applications.

Authors:  Hanying Li; Thomas H Labean; Kam W Leong
Journal:  Interface Focus       Date:  2011-06-28       Impact factor: 3.906

4.  Photon-regulated DNA-enzymatic nanostructures by molecular assembly.

Authors:  Mingxu You; Ruo-Wen Wang; Xiaobing Zhang; Yan Chen; Kelong Wang; Lu Peng; Weihong Tan
Journal:  ACS Nano       Date:  2011-11-28       Impact factor: 15.881

5.  Optical sensing by transforming chromophoric silver clusters in DNA nanoreactors.

Authors:  Jeffrey T Petty; Sandra P Story; Selina Juarez; Samuel S Votto; Austin G Herbst; Natalya N Degtyareva; Bidisha Sengupta
Journal:  Anal Chem       Date:  2011-12-08       Impact factor: 6.986

6.  High precision and high yield fabrication of dense nanoparticle arrays onto DNA origami at statistically independent binding sites.

Authors:  Sadao Takabayashi; William P Klein; Craig Onodera; Blake Rapp; Juan Flores-Estrada; Elias Lindau; Lejmarc Snowball; Joseph T Sam; Jennifer E Padilla; Jeunghoon Lee; William B Knowlton; Elton Graugnard; Bernard Yurke; Wan Kuang; William L Hughes
Journal:  Nanoscale       Date:  2014-11-21       Impact factor: 7.790

7.  Structural Characterization of Single-Stranded DNA Monolayers Using Two-Dimensional Sum Frequency Generation Spectroscopy.

Authors:  Jia-Jung Ho; David R Skoff; Ayanjeet Ghosh; Martin T Zanni
Journal:  J Phys Chem B       Date:  2015-08-10       Impact factor: 2.991

8.  Creation of Linear Carbon Dot Array with Improved Optical Properties through Controlled Covalent Conjugation with DNA.

Authors:  Sonam Kumari; Apurv Solanki; Saptarshi Mandal; Deepa Subramanyam; Prolay Das
Journal:  Bioconjug Chem       Date:  2018-04-12       Impact factor: 4.774

9.  Coupling strategies for the synthesis of Peptide-oligonucleotide conjugates for patterned synthetic biomineralization.

Authors:  Joshua D Carter; Thomas H Labean
Journal:  J Nucleic Acids       Date:  2011-10-09

10.  Magnesium-free self-assembly of multi-layer DNA objects.

Authors:  Thomas G Martin; Hendrik Dietz
Journal:  Nat Commun       Date:  2012       Impact factor: 14.919

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