Literature DB >> 21308384

Autotrophic, sulfur-oxidizing actinobacteria in acidic environments.

Paul R Norris1, Carol S Davis-Belmar, Carly F Brown, Leonides A Calvo-Bado.   

Abstract

Some novel actinobacteria from geothermal environments were shown to grow autotrophically with sulfur as an energy source. These bacteria have not been formally named and are referred to here as "Acidithiomicrobium" species, as the first of the acidophilic actinobacteria observed to grow on sulfur. They are related to Acidimicrobium ferrooxidans with which they share a capacity for ferrous iron oxidation. Ribulose bisphosphate carboxylase/oxygenase (RuBisCO) is active in CO(2) fixation by Acidimicrobium ferrooxidans, which appears to have acquired its RuBisCO-encoding genes from the proteobacterium Acidithiobacillus ferrooxidans or its ancestor. This lateral transfer of RuBisCO genes between a proteobacterium and an actinobacterium would add to those noted previously among proteobacteria, between proteobacteria and cyanobacteria and between proteobacteria and plastids. "Acidithiomicrobium" has RuBisCO-encoding genes which are most closely related to those of Acidimicrobium ferrooxidans and Acidithiobacillus ferrooxidans, and has additional RuBisCO genes of a different lineage. 16S rRNA gene sequences from "Acidithiomicrobium" species dominated clone banks of the genes extracted from mixed cultures of moderate thermophiles growing on copper sulfide and polymetallic sulfide ores in ore leaching columns.

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Year:  2011        PMID: 21308384     DOI: 10.1007/s00792-011-0358-3

Source DB:  PubMed          Journal:  Extremophiles        ISSN: 1431-0651            Impact factor:   2.395


  24 in total

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2.  Characteristics of Sulfobacillus acidophilus sp. nov. and other moderately thermophilic mineral-sulphide-oxidizing bacteria.

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Journal:  Microbiology (Reading)       Date:  1996-04       Impact factor: 2.777

3.  [Phylogeny of anoxygenic filamentous phototrophic bacteria of the family Oscillochloridaceae as inferred from comparative analyses of the rrs, cbbL, and nifH genes].

Authors:  T P Turova; E M Spiridonova; N V Slobodova; E S Bulygina; O I Keppen; B B Kuznetsov; R N Ivanovskiĭ
Journal:  Mikrobiologiia       Date:  2006 Mar-Apr

4.  Alignment-independent bilinear multivariate modelling (AIBIMM) for global analyses of 16S rRNA gene phylogeny.

Authors:  Knut Rudi; Monika Zimonja; Tormod Næs
Journal:  Int J Syst Evol Microbiol       Date:  2006-07       Impact factor: 2.747

5.  An oligonucleotide prokaryotic acidophile microarray: its validation and its use to monitor seasonal variations in extreme acidic environments with total environmental RNA.

Authors:  Patricia Garrido; Elena González-Toril; Antonio García-Moyano; Mercedes Moreno-Paz; Ricardo Amils; Víctor Parro
Journal:  Environ Microbiol       Date:  2008-01-30       Impact factor: 5.491

6.  Rampant horizontal transfer and duplication of rubisco genes in eubacteria and plastids.

Authors:  C F Delwiche; J D Palmer
Journal:  Mol Biol Evol       Date:  1996-07       Impact factor: 16.240

7.  Iamia majanohamensis gen. nov., sp. nov., an actinobacterium isolated from sea cucumber Holothuria edulis, and proposal of Iamiaceae fam. nov.

Authors:  Midori Kurahashi; Yukiyo Fukunaga; Yayoi Sakiyama; Shigeaki Harayama; Akira Yokota
Journal:  Int J Syst Evol Microbiol       Date:  2009-04       Impact factor: 2.747

8.  Methane oxidation at 55 degrees C and pH 2 by a thermoacidophilic bacterium belonging to the Verrucomicrobia phylum.

Authors:  Tajul Islam; Sigmund Jensen; Laila Johanne Reigstad; Oivind Larsen; Nils-Kåre Birkeland
Journal:  Proc Natl Acad Sci U S A       Date:  2008-01-02       Impact factor: 11.205

9.  A novel Acidimicrobium species in continuous cultures of moderately thermophilic, mineral-sulfide-oxidizing acidophiles.

Authors:  Adam A Cleaver; Nicolas P Burton; Paul R Norris
Journal:  Appl Environ Microbiol       Date:  2007-04-27       Impact factor: 4.792

Review 10.  Multiple Rubisco forms in proteobacteria: their functional significance in relation to CO2 acquisition by the CBB cycle.

Authors:  Murray Ronald Badger; Emily Jane Bek
Journal:  J Exp Bot       Date:  2008-02-02       Impact factor: 6.992

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  11 in total

1.  Microbial carbon, sulfur, iron, and nitrogen cycling linked to the potential remediation of a meromictic acidic pit lake.

Authors:  Diana Ayala-Muñoz; Jennifer L Macalady; Javier Sánchez-España; Carmen Falagán; Estelle Couradeau; William D Burgos
Journal:  ISME J       Date:  2022-09-19       Impact factor: 11.217

2.  Oxidation of Cytochrome 605 Is the Rate-Limiting Step when Ferrimicrobium acidiphilum Respires Aerobically on Soluble Iron.

Authors:  Robert C Blake; Jessie J Guidry; Micah D Anthony; Bhupal Ban; Kayla A Smith; Noelle N Walton; Richard G Painter
Journal:  Appl Environ Microbiol       Date:  2020-10-28       Impact factor: 4.792

3.  System-level understanding of the potential acid-tolerance components of Acidithiobacillus thiooxidans ZJJN-3 under extreme acid stress.

Authors:  Shoushuai Feng; Hailin Yang; Wu Wang
Journal:  Extremophiles       Date:  2015-08-12       Impact factor: 2.395

4.  Making a living while starving in the dark: metagenomic insights into the energy dynamics of a carbonate cave.

Authors:  Marianyoly Ortiz; Antje Legatzki; Julia W Neilson; Brandon Fryslie; William M Nelson; Rod A Wing; Carol A Soderlund; Barry M Pryor; Raina M Maier
Journal:  ISME J       Date:  2013-09-12       Impact factor: 10.302

Review 5.  Thermophilic and alkaliphilic Actinobacteria: biology and potential applications.

Authors:  L Shivlata; Tulasi Satyanarayana
Journal:  Front Microbiol       Date:  2015-09-25       Impact factor: 5.640

6.  Draft Genome Sequence of the Gram-Positive Neutrophilic Iron-Precipitating Kineosporia sp. Strain A_224.

Authors:  Burga Braun; Sven Künzel; Ulrich Szewzyk
Journal:  Genome Announc       Date:  2017-08-10

7.  Shotgun metagenomic sequencing from Manao-Pee cave, Thailand, reveals insight into the microbial community structure and its metabolic potential.

Authors:  Apirak Wiseschart; Wuttichai Mhuantong; Sithichoke Tangphatsornruang; Duriya Chantasingh; Kusol Pootanakit
Journal:  BMC Microbiol       Date:  2019-06-27       Impact factor: 3.605

8.  Co-occurrence patterns of plants and soil bacteria in the high-alpine subnival zone track environmental harshness.

Authors:  Andrew J King; Emily C Farrer; Katharine N Suding; Steven K Schmidt
Journal:  Front Microbiol       Date:  2012-10-11       Impact factor: 5.640

9.  Metatranscriptomic analysis of a high-sulfide aquatic spring reveals insights into sulfur cycling and unexpected aerobic metabolism.

Authors:  Anne M Spain; Mostafa S Elshahed; Fares Z Najar; Lee R Krumholz
Journal:  PeerJ       Date:  2015-09-22       Impact factor: 2.984

10.  Sulfur Fertilization Changes the Community Structure of Rice Root-, and Soil- Associated Bacteria.

Authors:  Sachiko Masuda; Zhihua Bao; Takashi Okubo; Kazuhiro Sasaki; Seishi Ikeda; Ryo Shinoda; Mizue Anda; Ryuji Kondo; Yumi Mori; Kiwamu Minamisawa
Journal:  Microbes Environ       Date:  2016-03-05       Impact factor: 2.912

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