Literature DB >> 21305705

Signaling pathways that control cell migration: models and analysis.

Erik S Welf1, Jason M Haugh.   

Abstract

Dissecting the intracellular signaling mechanisms that govern the movement of eukaryotic cells presents a major challenge, not only because of the large number of molecular players involved, but even more so because of the dynamic nature of their regulation by both biochemical and mechanical interactions. Computational modeling and analysis have emerged as useful tools for understanding how the physical properties of cells and their microenvironment are coupled with certain biochemical pathways to actuate and control cell motility. In this focused review, we highlight some of the more recent applications of quantitative modeling and analysis in the field of cell migration. Both in modeling and experiment, it has been prudent to follow a reductionist approach in order to characterize what are arguably the principal modules: spatial polarization of signaling pathways, regulation of the actin cytoskeleton, and dynamics of focal adhesions. While it is important that we 'cut our teeth' on these subsystems, focusing on the details of certain aspects while ignoring or coarse-graining others, it is clear that the challenge ahead will be to characterize the couplings between them in an integrated framework.
Copyright © 2010 John Wiley & Sons, Inc.

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Year:  2011        PMID: 21305705      PMCID: PMC3052860          DOI: 10.1002/wsbm.110

Source DB:  PubMed          Journal:  Wiley Interdiscip Rev Syst Biol Med        ISSN: 1939-005X


  56 in total

1.  A diffusion-translocation model for gradient sensing by chemotactic cells.

Authors:  M Postma; P J Van Haastert
Journal:  Biophys J       Date:  2001-09       Impact factor: 4.033

Review 2.  Cell mechanics and the cytoskeleton.

Authors:  Daniel A Fletcher; R Dyche Mullins
Journal:  Nature       Date:  2010-01-28       Impact factor: 49.962

3.  Distinguishing modes of eukaryotic gradient sensing.

Authors:  R Skupsky; W Losert; R J Nossal
Journal:  Biophys J       Date:  2005-08-05       Impact factor: 4.033

4.  In vivo dynamics of Rac-membrane interactions.

Authors:  Konstadinos Moissoglu; Boris M Slepchenko; Nahum Meller; Alan F Horwitz; Martin A Schwartz
Journal:  Mol Biol Cell       Date:  2006-04-05       Impact factor: 4.138

Review 5.  Computational processing and analysis of dynamic fluorescence image data.

Authors:  Jonas F Dorn; Gaudenz Danuser; Ge Yang
Journal:  Methods Cell Biol       Date:  2008       Impact factor: 1.441

6.  Phosphoinositides and Rho proteins spatially regulate actin polymerization to initiate and maintain directed movement in a one-dimensional model of a motile cell.

Authors:  Adriana T Dawes; Leah Edelstein-Keshet
Journal:  Biophys J       Date:  2006-11-10       Impact factor: 4.033

7.  A stochastic model for leukocyte random motility and chemotaxis based on receptor binding fluctuations.

Authors:  R T Tranquillo; D A Lauffenburger; S H Zigmond
Journal:  J Cell Biol       Date:  1988-02       Impact factor: 10.539

8.  Force transmission in migrating cells.

Authors:  Maxime F Fournier; Roger Sauser; Davide Ambrosi; Jean-Jacques Meister; Alexander B Verkhovsky
Journal:  J Cell Biol       Date:  2010-01-25       Impact factor: 10.539

9.  The simulation of stress fibre and focal adhesion development in cells on patterned substrates.

Authors:  Amit Pathak; Vikram S Deshpande; Robert M McMeeking; Anthony G Evans
Journal:  J R Soc Interface       Date:  2008-05-06       Impact factor: 4.118

10.  Quantification of local morphodynamics and local GTPase activity by edge evolution tracking.

Authors:  Yuki Tsukada; Kazuhiro Aoki; Takeshi Nakamura; Yuichi Sakumura; Michiyuki Matsuda; Shin Ishii
Journal:  PLoS Comput Biol       Date:  2008-11-14       Impact factor: 4.475

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  31 in total

1.  Global gene profiling of VCP-associated inclusion body myopathy.

Authors:  Angèle Nalbandian; Svetlana Ghimbovschi; Shlomit Radom-Aizik; Eric Dec; Jouni Vesa; Barbara Martin; Susan Knoblach; Charles Smith; Eric Hoffman; Virginia E Kimonis
Journal:  Clin Transl Sci       Date:  2012-04-04       Impact factor: 4.689

2.  Quantifying trophoblast migration: In vitro approaches to address in vivo situations.

Authors:  Joanna James; Win Tun; Alys Clark
Journal:  Cell Adh Migr       Date:  2015-10-19       Impact factor: 3.405

Review 3.  Subcellular optogenetics - controlling signaling and single-cell behavior.

Authors:  W K Ajith Karunarathne; Patrick R O'Neill; Narasimhan Gautam
Journal:  J Cell Sci       Date:  2014-11-28       Impact factor: 5.285

4.  Targeted Proteomics-Driven Computational Modeling of Macrophage S1P Chemosensing.

Authors:  Nathan P Manes; Bastian R Angermann; Marijke Koppenol-Raab; Eunkyung An; Virginie H Sjoelund; Jing Sun; Masaru Ishii; Ronald N Germain; Martin Meier-Schellersheim; Aleksandra Nita-Lazar
Journal:  Mol Cell Proteomics       Date:  2015-07-21       Impact factor: 5.911

5.  MIEN1 promotes oral cancer progression and implicates poor overall survival.

Authors:  Smrithi Rajendiran; Marilyne Kpetemey; Sayantan Maji; Lee D Gibbs; Subhamoy Dasgupta; Rebecca Mantsch; Richard J Hare; Jamboor K Vishwanatha
Journal:  Cancer Biol Ther       Date:  2015       Impact factor: 4.742

6.  A Reaction-Diffusion Model Explains Amplification of the PLC/PKC Pathway in Fibroblast Chemotaxis.

Authors:  Krithika Mohan; Jamie L Nosbisch; Timothy C Elston; James E Bear; Jason M Haugh
Journal:  Biophys J       Date:  2017-07-11       Impact factor: 4.033

7.  Dynamics of Mechanosensitive Nascent Adhesion Formation.

Authors:  Laurent MacKay; Anmar Khadra
Journal:  Biophys J       Date:  2019-08-12       Impact factor: 4.033

8.  PLEKHG3 enhances polarized cell migration by activating actin filaments at the cell front.

Authors:  Trang Thi Thu Nguyen; Wei Sun Park; Byung Ouk Park; Cha Yeon Kim; Yohan Oh; Jin Man Kim; Hana Choi; Taeyoon Kyung; Cheol-Hee Kim; Gabsang Lee; Klaus M Hahn; Tobias Meyer; Won Do Heo
Journal:  Proc Natl Acad Sci U S A       Date:  2016-08-23       Impact factor: 11.205

9.  Mechanism of retinal pericyte migration through Angiopoietin/Tie-2 signaling pathway on diabetic rats.

Authors:  Nadia Artha Dewi; Aulanni'am Aulanni'am; Hidayat Sujuti; Muhammad Aris Widodo; Djoko Wahono Soeatmadji
Journal:  Int J Ophthalmol       Date:  2018-03-18       Impact factor: 1.779

Review 10.  Envisioning migration: mathematics in both experimental analysis and modeling of cell behavior.

Authors:  Elizabeth R Zhang; Lani F Wu; Steven J Altschuler
Journal:  Curr Opin Cell Biol       Date:  2013-05-06       Impact factor: 8.382

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