Literature DB >> 21304469

Dissection of human vitreous body elements for proteomic analysis.

Jessica M Skeie1, Vinit B Mahajan.   

Abstract

The vitreous is an optically clear, collagenous extracellular matrix that fills the inside of the eye and overlies the retina. (1,2) Abnormal interactions between vitreous substructures and the retina underlie several vitreoretinal diseases, including retinal tear and detachment, macular pucker, macular hole, age-related macular degeneration, vitreomacular traction, proliferative vitreoretinopathy, proliferative diabetic retinopathy, and inherited vitreoretinopathies. (1,2) The molecular composition of the vitreous substructures is not known. Since the vitreous body is transparent with limited surgical access, it has been difficult to study its substructures at the molecular level. We developed a method to separate and preserve these tissues for proteomic and biochemical analysis. The dissection technique in this experimental video shows how to isolate vitreous base, anterior hyaloid, vitreous core, and vitreous cortex from postmortem human eyes. One-dimensional SDS-PAGE analyses of each vitreous component showed that our dissection technique resulted in four unique protein profiles corresponding to each substructure of the human vitreous body. Identification of differentially compartmentalized proteins will reveal candidate molecules underlying various vitreoretinal diseases.

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Mesh:

Year:  2011        PMID: 21304469      PMCID: PMC3182653          DOI: 10.3791/2455

Source DB:  PubMed          Journal:  J Vis Exp        ISSN: 1940-087X            Impact factor:   1.355


  6 in total

Review 1.  Structural macromolecules and supramolecular organisation of the vitreous gel.

Authors:  P N Bishop
Journal:  Prog Retin Eye Res       Date:  2000-05       Impact factor: 21.198

2.  Formalin-fixed paraffin-embedded (FFPE) proteome analysis using gel-free and gel-based proteomics.

Authors:  Omid Azimzadeh; Zarko Barjaktarovic; Michaela Aubele; Julia Calzada-Wack; Hakan Sarioglu; Michael J Atkinson; Soile Tapio
Journal:  J Proteome Res       Date:  2010-09-03       Impact factor: 4.466

3.  Molecular biology of pharmacologic vitreolysis.

Authors:  J Sebag
Journal:  Trans Am Ophthalmol Soc       Date:  2005

4.  Comprehensive analysis of inflammatory immune mediators in vitreoretinal diseases.

Authors:  Takeru Yoshimura; Koh-hei Sonoda; Mika Sugahara; Yasutaka Mochizuki; Hiroshi Enaida; Yuji Oshima; Akifumi Ueno; Yasuaki Hata; Hiroki Yoshida; Tatsuro Ishibashi
Journal:  PLoS One       Date:  2009-12-04       Impact factor: 3.240

5.  Characterization of the vitreous proteome in diabetes without diabetic retinopathy and diabetes with proliferative diabetic retinopathy.

Authors:  Ben-Bo Gao; Xiaohong Chen; Nigel Timothy; Lloyd Paul Aiello; Edward P Feener
Journal:  J Proteome Res       Date:  2008-04-24       Impact factor: 4.466

6.  Extracellular SOD and VEGF are increased in vitreous bodies from proliferative diabetic retinopathy patients.

Authors:  Hiroshi Izuta; Yuichi Chikaraishi; Tetsuo Adachi; Masamitsu Shimazawa; Tetsuya Sugiyama; Tsunehiko Ikeda; Hideaki Hara
Journal:  Mol Vis       Date:  2009-12-10       Impact factor: 2.367

  6 in total
  19 in total

1.  Evisceration of mouse vitreous and retina for proteomic analyses.

Authors:  Jessica M Skeie; Stephen H Tsang; Vinit B Mahajan
Journal:  J Vis Exp       Date:  2011-04-03       Impact factor: 1.355

2.  Translational vitreous proteomics.

Authors:  Vinit B Mahajan; Jessica M Skeie
Journal:  Proteomics Clin Appl       Date:  2013-11-04       Impact factor: 3.494

3.  Extracellular superoxide dismutase (SOD3) regulates oxidative stress at the vitreoretinal interface.

Authors:  Katherine J Wert; Gabriel Velez; Madeline R Cross; Brett A Wagner; Melissa L Teoh-Fitzgerald; Garry R Buettner; J Jason McAnany; Alicia Olivier; Stephen H Tsang; Matthew M Harper; Frederick E Domann; Alexander G Bassuk; Vinit B Mahajan
Journal:  Free Radic Biol Med       Date:  2018-06-22       Impact factor: 7.376

4.  The proteome of human retina.

Authors:  Pingbo Zhang; Craig Dufresne; Randi Turner; Sara Ferri; Vidya Venkatraman; Rabia Karani; Gerard A Lutty; Jennifer E Van Eyk; Richard D Semba
Journal:  Proteomics       Date:  2015-01-14       Impact factor: 3.984

5.  Whole vitreous humor dissection for vitreodynamic analysis.

Authors:  Karthik Murali; Amir H Kashani; Mark S Humayun
Journal:  J Vis Exp       Date:  2015-05-24       Impact factor: 1.355

6.  Proteomic analysis of vitreous biopsy techniques.

Authors:  Jessica M Skeie; Eric N Brown; Harryl D Martinez; Stephen R Russell; Emily S Birkholz; James C Folk; H Culver Boldt; Karen M Gehrs; Edwin M Stone; Michael E Wright; Vinit B Mahajan
Journal:  Retina       Date:  2012 Nov-Dec       Impact factor: 4.256

7.  Dissection of Human Retina and RPE-Choroid for Proteomic Analysis.

Authors:  Thiago Cabral; Marcus A Toral; Gabriel Velez; James E DiCarlo; Anuradha M Gore; MaryAnn Mahajan; Stephen H Tsang; Alexander G Bassuk; Vinit B Mahajan
Journal:  J Vis Exp       Date:  2017-11-12       Impact factor: 1.355

8.  Defining the proteome of human iris, ciliary body, retinal pigment epithelium, and choroid.

Authors:  Pingbo Zhang; David Kirby; Craig Dufresne; Yan Chen; Randi Turner; Sara Ferri; Deepak P Edward; Jennifer E Van Eyk; Richard D Semba
Journal:  Proteomics       Date:  2016-03-11       Impact factor: 3.984

9.  Proteomic analyses of the vitreous humour.

Authors:  Martina Angi; Helen Kalirai; Sarah E Coupland; Bertil E Damato; Francesco Semeraro; Mario R Romano
Journal:  Mediators Inflamm       Date:  2012-08-29       Impact factor: 4.711

10.  Proteomic insight into the molecular function of the vitreous.

Authors:  Jessica M Skeie; C Nathaniel Roybal; Vinit B Mahajan
Journal:  PLoS One       Date:  2015-05-28       Impact factor: 3.240

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