Literature DB >> 21302791

Combining registration and active shape models for the automatic segmentation of the lymph node regions in head and neck CT images.

Antong Chen1, Matthew A Deeley, Kenneth J Niermann, Luigi Moretti, Benoit M Dawant.   

Abstract

PURPOSE: Intensity-modulated radiation therapy (IMRT) is the state of the art technique for head and neck cancer treatment. It requires precise delineation of the target to be treated and structures to be spared, which is currently done manually. The process is a time-consuming task of which the delineation of lymph node regions is often the longest step. Atlas-based delineation has been proposed as an alternative, but, in the authors' experience, this approach is not accurate enough for routine clinical use. Here, the authors improve atlas-based segmentation results obtained for level II-IV lymph node regions using an active shape model (ASM) approach.
METHODS: An average image volume was first created from a set of head and neck patient images with minimally enlarged nodes. The average image volume was then registered using affine, global, and local nonrigid transformations to the other volumes to establish a correspondence between surface points in the atlas and surface points in each of the other volumes. Once the correspondence was established, the ASMs were created for each node level. The models were then used to first constrain the results obtained with an atlas-based approach and then to iteratively refine the solution.
RESULTS: The method was evaluated through a leave-one-out experiment. The ASM- and atlas-based segmentations were compared to manual delineations via the Dice similarity coefficient (DSC) for volume overlap and the Euclidean distance between manual and automatic 3D surfaces. The mean DSC value obtained with the ASM-based approach is 10.7% higher than with the atlas-based approach; the mean and median surface errors were decreased by 13.6% and 12.0%, respectively.
CONCLUSIONS: The ASM approach is effective in reducing segmentation errors in areas of low CT contrast where purely atlas-based methods are challenged. Statistical analysis shows that the improvements brought by this approach are significant.

Entities:  

Mesh:

Year:  2010        PMID: 21302791      PMCID: PMC3000861          DOI: 10.1118/1.3515459

Source DB:  PubMed          Journal:  Med Phys        ISSN: 0094-2405            Impact factor:   4.071


  7 in total

1.  Active shape model segmentation with optimal features.

Authors:  Bram van Ginneken; Alejandro F Frangi; Joes J Staal; Bart M ter Haar Romeny; Max A Viergever
Journal:  IEEE Trans Med Imaging       Date:  2002-08       Impact factor: 10.048

2.  The adaptive bases algorithm for intensity-based nonrigid image registration.

Authors:  Gustavo K Rohde; Akram Aldroubi; Benoit M Dawant
Journal:  IEEE Trans Med Imaging       Date:  2003-11       Impact factor: 10.048

3.  Automatic construction of multiple-object three-dimensional statistical shape models: application to cardiac modeling.

Authors:  Alejandro F Frangi; Daniel Rueckert; Julia A Schnabel; Wiro J Niessen
Journal:  IEEE Trans Med Imaging       Date:  2002-09       Impact factor: 10.048

4.  Using Frankenstein's creature paradigm to build a patient specific atlas.

Authors:  Olivier Commowick; Simon K Warfield; Grégoire Malandain
Journal:  Med Image Comput Comput Assist Interv       Date:  2009

5.  Reduce in variation and improve efficiency of target volume delineation by a computer-assisted system using a deformable image registration approach.

Authors:  K S Clifford Chao; Shreerang Bhide; Hansen Chen; Joshua Asper; Steven Bush; Gregg Franklin; Vivek Kavadi; Vichaivood Liengswangwong; William Gordon; Adam Raben; Jon Strasser; Christopher Koprowski; Steven Frank; Gregory Chronowski; Anesa Ahamad; Robert Malyapa; Lifei Zhang; Lei Dong
Journal:  Int J Radiat Oncol Biol Phys       Date:  2007-08-01       Impact factor: 7.038

6.  Evaluation of an atlas-based automatic segmentation software for the delineation of brain organs at risk in a radiation therapy clinical context.

Authors:  Aurélie Isambert; Frédéric Dhermain; François Bidault; Olivier Commowick; Pierre-Yves Bondiau; Grégoire Malandain; Dimitri Lefkopoulos
Journal:  Radiother Oncol       Date:  2007-12-26       Impact factor: 6.280

7.  Atlas-based delineation of lymph node levels in head and neck computed tomography images.

Authors:  Olivier Commowick; Vincent Grégoire; Grégoire Malandain
Journal:  Radiother Oncol       Date:  2008-02-14       Impact factor: 6.280

  7 in total
  13 in total

1.  Evaluation of multiple-atlas-based strategies for segmentation of the thyroid gland in head and neck CT images for IMRT.

Authors:  A Chen; K J Niermann; M A Deeley; B M Dawant
Journal:  Phys Med Biol       Date:  2011-11-29       Impact factor: 3.609

Review 2.  Vision 20/20: perspectives on automated image segmentation for radiotherapy.

Authors:  Gregory Sharp; Karl D Fritscher; Vladimir Pekar; Marta Peroni; Nadya Shusharina; Harini Veeraraghavan; Jinzhong Yang
Journal:  Med Phys       Date:  2014-05       Impact factor: 4.071

3.  CNN-based hierarchical coarse-to-fine segmentation of pelvic CT images for prostate cancer radiotherapy.

Authors:  Sharmin Sultana; Adam Robinson; Daniel Y Song; Junghoon Lee
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2020-03-16

4.  Segmentation of organs-at-risks in head and neck CT images using convolutional neural networks.

Authors:  Bulat Ibragimov; Lei Xing
Journal:  Med Phys       Date:  2017-02       Impact factor: 4.071

5.  Quantitative tumor segmentation for evaluation of extent of glioblastoma resection to facilitate multisite clinical trials.

Authors:  James S Cordova; Eduard Schreibmann; Costas G Hadjipanayis; Ying Guo; Hui-Kuo G Shu; Hyunsuk Shim; Chad A Holder
Journal:  Transl Oncol       Date:  2014-02-01       Impact factor: 4.243

6.  Hierarchical Vertex Regression-Based Segmentation of Head and Neck CT Images for Radiotherapy Planning.

Authors: 
Journal:  IEEE Trans Image Process       Date:  2018-02       Impact factor: 10.856

7.  Atlas-based automatic segmentation of head and neck organs at risk and nodal target volumes: a clinical validation.

Authors:  Jean-François Daisne; Andreas Blumhofer
Journal:  Radiat Oncol       Date:  2013-06-26       Impact factor: 3.481

8.  Learning anatomy changes from patient populations to create artificial CT images for voxel-level validation of deformable image registration.

Authors:  Z Henry Yu; Rajat Kudchadker; Lei Dong; Yongbin Zhang; Laurence E Court; Firas Mourtada; Adam Yock; Susan L Tucker; Jinzhong Yang
Journal:  J Appl Clin Med Phys       Date:  2016-01-08       Impact factor: 2.102

9.  Comparative clinical evaluation of atlas and deep-learning-based auto-segmentation of organ structures in liver cancer.

Authors:  Sang Hee Ahn; Adam Unjin Yeo; Kwang Hyeon Kim; Chankyu Kim; Youngmoon Goh; Shinhaeng Cho; Se Byeong Lee; Young Kyung Lim; Haksoo Kim; Dongho Shin; Taeyoon Kim; Tae Hyun Kim; Sang Hee Youn; Eun Sang Oh; Jong Hwi Jeong
Journal:  Radiat Oncol       Date:  2019-11-27       Impact factor: 3.481

10.  Deep Deconvolutional Neural Network for Target Segmentation of Nasopharyngeal Cancer in Planning Computed Tomography Images.

Authors:  Kuo Men; Xinyuan Chen; Ye Zhang; Tao Zhang; Jianrong Dai; Junlin Yi; Yexiong Li
Journal:  Front Oncol       Date:  2017-12-20       Impact factor: 6.244

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