Literature DB >> 21301100

Preliminary joint neutron time-of-flight and X-ray crystallographic study of human ABO(H) blood group A glycosyltransferase.

B Schuman1, S Z Fisher, A Kovalevsky, S N Borisova, M M Palcic, L Coates, P Langan, S V Evans.   

Abstract

The biosyntheses of oligosaccharides and glycoconjugates are conducted by glycosyltransferases. These extraordinarily diverse and widespread enzymes catalyze the formation of glycosidic bonds through the transfer of a monosaccharide from a donor molecule to an acceptor molecule, with the stereochemistry about the anomeric carbon being either inverted or retained. Human ABO(H) blood group A α-1,3-N-acetylgalactosaminyltransferase (GTA) generates the corresponding antigen by the transfer of N-acetylgalactosamine from UDP-GalNAc to the blood group H antigen. To understand better how specific active-site-residue protons and hydrogen-bonding patterns affect substrate recognition and catalysis, neutron diffraction studies were initiated at the Protein Crystallography Station (PCS) at Los Alamos Neutron Science Center (LANSCE). A large single crystal was subjected to H/D exchange prior to data collection and time-of-flight neutron diffraction data were collected to 2.5 Å resolution at the PCS to ∼85% overall completeness, with complementary X-ray diffraction data collected from a crystal from the same drop and extending to 1.85 Å resolution. Here, the first successful neutron data collection from a glycosyltransferase is reported.

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Year:  2011        PMID: 21301100      PMCID: PMC3034622          DOI: 10.1107/S1744309110051298

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  37 in total

1.  Quantum model of catalysis based on a mobile proton revealed by subatomic x-ray and neutron diffraction studies of h-aldose reductase.

Authors:  Matthew P Blakeley; Federico Ruiz; Raul Cachau; Isabelle Hazemann; Flora Meilleur; Andre Mitschler; Stephan Ginell; Pavel Afonine; Oscar N Ventura; Alexandra Cousido-Siah; Michael Haertlein; Andrzej Joachimiak; Dean Myles; Alberto Podjarny
Journal:  Proc Natl Acad Sci U S A       Date:  2008-02-04       Impact factor: 11.205

2.  Donor substrate specificity of recombinant human blood group A, B and hybrid A/B glycosyltransferases expressed in Escherichia coli.

Authors:  N O Seto; C A Compston; S V Evans; D R Bundle; S A Narang; M M Palcic
Journal:  Eur J Biochem       Date:  1999-02

3.  Cysteine-to-serine mutants dramatically reorder the active site of human ABO(H) blood group B glycosyltransferase without affecting activity: structural insights into cooperative substrate binding.

Authors:  Brock Schuman; Mattias Persson; Roxanne C Landry; Robert Polakowski; Joel T Weadge; Nina O L Seto; Svetlana N Borisova; Monica M Palcic; Stephen V Evans
Journal:  J Mol Biol       Date:  2010-07-23       Impact factor: 5.469

4.  A neutron crystallographic analysis of phosphate-free ribonuclease A at 1.7 A resolution.

Authors:  Daichi Yagi; Taro Yamada; Kazuo Kurihara; Yuki Ohnishi; Masahiro Yamashita; Taro Tamada; Ichiro Tanaka; Ryota Kuroki; Nobuo Niimura
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-08-06

5.  Rapid determination of hydrogen positions and protonation states of diisopropyl fluorophosphatase by joint neutron and X-ray diffraction refinement.

Authors:  Marc-Michael Blum; Marat Mustyakimov; Heinz Rüterjans; Kai Kehe; Benno P Schoenborn; Paul Langan; Julian C-H Chen
Journal:  Proc Natl Acad Sci U S A       Date:  2009-01-09       Impact factor: 11.205

6.  The structural basis for specificity in human ABO(H) blood group biosynthesis.

Authors:  Sonia I Patenaude; Nina O L Seto; Svetlana N Borisova; Adam Szpacenko; Sandra L Marcus; Monica M Palcic; Stephen V Evans
Journal:  Nat Struct Biol       Date:  2002-09

7.  Neutron diffraction studies of a class A beta-lactamase Toho-1 E166A/R274N/R276N triple mutant.

Authors:  Stephen J Tomanicek; Matthew P Blakeley; Jonathan Cooper; Yu Chen; Pavel V Afonine; Leighton Coates
Journal:  J Mol Biol       Date:  2009-12-28       Impact factor: 5.469

Review 8.  Scaling and assessment of data quality.

Authors:  Philip Evans
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14

9.  Generalized X-ray and neutron crystallographic analysis: more accurate and complete structures for biological macromolecules.

Authors:  Paul D Adams; Marat Mustyakimov; Pavel V Afonine; Paul Langan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-05-15

10.  Protein structures by spallation neutron crystallography.

Authors:  Paul Langan; Zoë Fisher; Andrii Kovalevsky; Marat Mustyakimov; Amanda Sutcliffe Valone; Cliff Unkefer; Mary Jo Waltman; Leighton Coates; Paul D Adams; Pavel V Afonine; Brad Bennett; Chris Dealwis; Benno P Schoenborn
Journal:  J Synchrotron Radiat       Date:  2008-04-18       Impact factor: 2.616

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  2 in total

1.  Crystals on the cover 2012.

Authors:  Howard Einspahr; Manfred S Weiss
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-12-24

2.  Geometric attributes of retaining glycosyltransferase enzymes favor an orthogonal mechanism.

Authors:  Brock Schuman; Stephen V Evans; Thomas M Fyles
Journal:  PLoS One       Date:  2013-08-01       Impact factor: 3.240

  2 in total

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